2025 |
Anpalagan K, Bowen AC, Lamborn L, Roebuck D, Carter T, Cannon JW, et al., 'Optimising detection of thrombosis in paediatric
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2025 |
Turner A, Van Driel ML, Mitchell BL, Davis JS, Tapley A, Holliday E, et al., 'Changing the antibiotic prescribing of Australian general practice registrars' for acute respiratory tract infections: A non-randomized controlled trial', Family Practice, 42 (2025) [C1]
Background: Inappropriate antibiotic prescription for self-limiting respiratory tract infections (RTIs) by general practitioner (GP) registrars (trainees) is less common than by e... [more]
Background: Inappropriate antibiotic prescription for self-limiting respiratory tract infections (RTIs) by general practitioner (GP) registrars (trainees) is less common than by established GPs but still exceeds evidence-based benchmarks. A 2014 face-To-face educational intervention for registrars and supervisors reduced registrars' acute bronchitis antibiotic prescription by 16% (absolute reduction). We aimed to establish the efficacy of an updated registrar/supervisor RTI-management intervention (delivered at distance) on antibiotic prescribing. Methods: A non-randomized trial using a non-equivalent control-group nested within the ReCEnT cohort study. The intervention included online educational modules, registrar and supervisor webinars, and materials for registrar-supervisor in-practice educational sessions, and focussed on acute bronchitis as an exemplar RTI. The theoretical underpinning was the 'capability, opportunity, and motivation' (COM-B) framework. The intervention was delivered to registrars and supervisors of one large educational/training organization annually from mid-2021, with pre-intervention period from 2017, and with postintervention period ending 2023. Two other educational/training organizations served as controls. The primary outcome was antibiotics prescribed for acute bronchitis. Analyses used multivariable logistic regression with predictors of interest: Time (before/after intervention), treatment group, and an interaction term for time-by-Treatment group, adjusted for potential confounders. The interaction term P-value was used to infer statistical significance of the intervention effect. Results: Of 4612 acute bronchitis presentations, 70% were prescribed antibiotics. There was a 6.9% absolute reduction (adjusted) of prescribing in the intervention-group compared with the control-group. This was not statistically significant (Pinteraction.22). Conclusions: Failure to find a significant effect on prescribing suggests difficulties with scalability of this (and similar educational) innovations.
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2025 |
Golding DM, Bloomfield M, Davis J, Delaney A, Hills T, Tong SYC, Young PJ, 'Clinician views on selective decontamination of the digestive tract in mechanically ventilated patients in intensive care units: A survey', Australian Critical Care, 38 (2025)
Objective: Selective decontamination of the digestive tract (SDD) has been investigated as a strategy to reduce the incidence of ventilator-associated pneumonia (VAP) and other he... [more]
Objective: Selective decontamination of the digestive tract (SDD) has been investigated as a strategy to reduce the incidence of ventilator-associated pneumonia (VAP) and other healthcare-associated infections in intensive care unit (ICU) patients receiving mechanical ventilation. There is some evidence to suggest that the use of SDD is associated with a reduction in healthcare-associated infection and mortality; however, the uptake of SDD in ICUs in Australia and New Zealand (ANZ) remains low. To better understand the potential reasons, we designed a questionnaire to gather views from specialists in intensive care medicine, infectious diseases, and medical microbiology. Design: The study incorporated an online survey. Setting and participants: An online survey was distributed to specialists in intensive care medicine, infectious diseases, and medical microbiology working in ANZ. Main outcome measures: The main outcome measures are views about SDD and perceived barriers to implementation in ICUs in ANZ. Results: A total of 103 responses were obtained, of which 55 were from intensive care medicine specialists and the remainder from infectious disease/medical microbiology specialists. No respondents currently used SDD in their hospital ICU. Intensive care medicine specialists self-reported better understanding of the evidence base regarding SDD (P = 0.032) and were more likely to believe that SDD was a safe therapy (P < 0.001) and that it was associated with a reduction in the incidence of VAP (P < 0.001) and ICU mortality (P < 0.001). Infectious disease/medical microbiology specialists were more likely to believe there is currently a lack of evidence of benefit (P < 0.001) and a risk of harm (P < 0.001) associated with SDD. Conclusions: Specialists in intensive care medicine had more positive views about use of SDD in ventilated patients than did specialists in infectious diseases/medical microbiology, but no respondents reported using SDD in their clinical practice.
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2025 |
Legg A, Ferguson JK, Munnoch S-A, Davis JS, 'Not "a cute" complication: phenotypic analysis of acute kidney injury in Staphylococcus aureus bacteraemia.', Clin Microbiol Infect, 31 643-646 (2025)
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2025 |
Johns BP, Loewenthal MR, Dewar DC, Manning LA, Davis JS, 'Comparison of surgical treatments for hip and knee periprosthetic joint infections using the desirability of outcome ranking in a prospective multicentre study', Journal of Bone and Joint Infection, 10 73-84 (2025)
Introduction: In periprosthetic joint infection (PJI), there is a paucity of prospective data comparing debridement, antibiotics and implant retention (DAIR) with two-stage revisi... [more]
Introduction: In periprosthetic joint infection (PJI), there is a paucity of prospective data comparing debridement, antibiotics and implant retention (DAIR) with two-stage revision while also accounting for time since the initial arthroplasty. Additionally, comparisons often lack patient-centred measures. A desirability of outcome ranking for PJI (DOOR-PJI) unifies joint function, infection cure and mortality into one outcome. We aimed to describe the DOOR-PJI distribution in a large patient cohort and use it to compare DAIR and two-stage revision. Methods: Adults with a newly diagnosed hip or knee PJI from the prospective Prosthetic joint Infection in Australia and New Zealand Observational (PIANO) study were analysed. Patients from 27 hospitals were included. PJI was classified as "early"or "late". The primary outcome was the novel DOOR-PJI at the 2-year follow-up. Results were expressed using win ratio (WR) values. A WR > 1.0 indicates that two-stage revision was superior to DAIR. Results: A DOOR was available for 533 patients. The most common treatments were DAIR (297 patients, 56 %) and two-stage revision (139 patients, 26 %). In early PJI, DAIR was superior to two-stage revision (WR 0.51, 95 % confidence interval (CI) [0.30-0.86], pCombining double low line 0.012). In late PJI, two-stage revision was superior to DAIR (WR 1.61, 95 % CI [1.11-2.33], pCombining double low line 0.012). These findings persisted following stratification by comorbidities, affected joint, symptom duration and a sensitivity analysis applying the initial (rather than the main) surgical strategy at day 90. Conclusions: In the first application of a DOOR in orthopaedics, DAIR was superior to two-stage revision for early PJI. Conversely, two-stage revision was superior compared with DAIR for late PJI. These findings were independent of comorbidities and symptom duration.
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2025 |
Hernández-Mitre MP, Morpeth SC, Venkatesh B, Hills TE, Davis J, Mahar RK, et al., 'Erratum to 'TMPRSS2 inhibitors for the treatment of COVID-19 in adults: a systematic review and meta-analysis of randomized clinical trials of nafamostat and camostat mesylate' [Clin Microbiol Infect (30) (2024) 743 754, (S1198743X24000557), (10.1016/j.cmi.2024.01.029)]', Clinical Microbiology and Infection, 31 141 (2025)
The publisher regrets that the link provided in reference 17 is incorrect. The correct reference is as below. Hernández-Mitre MP, Morpeth SC, Venkatesh B, Hills TE, Davis J, Mahar... [more]
The publisher regrets that the link provided in reference 17 is incorrect. The correct reference is as below. Hernández-Mitre MP, Morpeth SC, Venkatesh B, Hills TE, Davis J, Mahar RK et al. TMPRSS2 inhibitors for the treatment of COVID-19 in adults: a systematic review and meta-analysis of nafamostat and camostat mesylate randomised clinical trials. Inplasy Protocol 2023. https://doi.org/10.37766/inplasy2023.2.0120. The journal would like to apologise for any inconvenience caused.
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2025 |
Mahar RK, McGlothlin A, Dymock M, Barina L, Bonten M, Bowen A, et al., 'Statistical documentation for multi-disease, multi-domain platform trials: our experience with the Staphylococcus aureus Network Adaptive Platform trial', Trials, 26 (2025)
Platform trials have become widely adopted across multiple disease areas over recent years, however, guidelines for operationalising these trials have not kept pace. We outline a ... [more]
Platform trials have become widely adopted across multiple disease areas over recent years, however, guidelines for operationalising these trials have not kept pace. We outline a series of documents that summarise the statistical components, and implicit processes, of the Staphylococcus aureus Network Adaptive Platform (SNAP) trial to provide an informal template for other researchers and reviewers of platform trials. We briefly summarise the content and role of the core protocol, statistical appendix, domain-specific appendices, simulation report, statistical implementation guides, data safety and monitoring committee (DSMC) reports, and domain-specific statistical analysis plans and final reports, and a transparent governance structure that ensures separate blinded and unblinded statistical teams. In the absence of guidelines or checklists for platform trial statistical documents, we hope to provide useful guidance to others in terms of what has worked so far for the SNAP trial, stimulate discussion, and inform a future consensus. Trial registrationNCT05137119. Registered on 30 November 2021.
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2025 |
Cooper D, Athan E, Yates P, Aboltins C, Davis JS, Manning L, Australasian Society for Infectious Diseases Clinical Research Network, 'How Much Does Prosthetic Joint Infection and Its Successful Treatment Affect Patient-reported Quality of Life?', Clin Orthop Relat Res, 483 160-170 (2025) [C1]
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2025 |
Hadley-Brown K, Hailstone L, Devane R, Chan T, Devaux A, Davis JS, et al., 'Prophylactic Antibiotics in Adults With Acute Brain Injury Who Are Invasively Ventilated in the ICU: A Systematic Review and Meta-Analysis', Chest, 167 1079-1089 (2025)
Background: Lower respiratory tract infections are common in patients receiving invasive mechanical ventilation in an ICU after an acute brain injury and may have deleterious cons... [more]
Background: Lower respiratory tract infections are common in patients receiving invasive mechanical ventilation in an ICU after an acute brain injury and may have deleterious consequences. Research Question: In adults with acute brain injury receiving invasive mechanical ventilation in an ICU, is the administration of prophylactic parenteral antibiotics, compared with placebo or usual care, associated with reduced mortality? Study Design and Methods: We conducted a systematic review and meta-analysis. We searched for randomized clinical trials in electronic databases, as well as unpublished trials. The primary outcome was hospital mortality, and secondary outcomes included the incidence of ventilator-associated pneumonia, ICU length of stay, and duration of mechanical ventilation. We used a random effects model to estimate the pooled risk ratio (RR) with corresponding 95% CI for binary outcomes and the mean difference (MD) with 95% CI for continuous outcomes. Certainty of evidence was evaluated using Grading of Recommendations Assessment Development and Evaluation methods. Results: One thousand seven hundred twenty-eight reports of studies were screened, with 7 randomized controlled trials recruiting 835 participants included. No trials were adjudicated as having a high risk of bias. The pooled estimated RR for mortality associated with the use of prophylactic antibiotics was 0.91 (95% CI, 0.70-1.17; P = .39; low certainty). The pooled estimated RR for ventilator-associated pneumonia was 0.56 (95% CI, 0.35-0.89; low certainty). The pooled estimated duration of mechanical ventilation for those allocated to prophylactic antibiotics compared with control participants (MD, ¿2.0 days; 95% CI, ¿6.1 to 2.1 days; very low certainty) and duration of ICU admission (MD, ¿2.2 days; 95% CI, ¿5.4 to 1.1 days; very low certainty) were similar. Interpretation: Current evidence from randomized clinical trials does not provide definitive evidence regarding the effect of prophylactic antibiotics on mortality in patients receiving invasive mechanical ventilation in the ICU. Clinical Trial Registry: International Prospective Register of Systematic Reviews; No.: CRD42023424732; URL: https://www.crd.york.ac.uk/prospero/
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2025 |
Gao Y, Magin P, Tapley A, Holliday E, Dizon J, Fisher K, et al., 'Prevalence of Antibiotic Prescribing for Acute Respiratory Tract Infection in Telehealth Versus Face-to-Face Consultations: Cross-Sectional Analysis of General Practice Registrars' Clinical Practice.', J Med Internet Res, 27 e60831 (2025)
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2025 |
Ong SWX, Daneman N, Davis JS, Tong SYC, Lye DC, Yahav D, et al., 'Association of Daily Body Temperature, White Blood Cell Count, and C-reactive Protein With Mortality and Persistent Bacteremia in Patients With Staphylococcus Aureus Bacteremia: A Post Hoc Analysis of the CAMERA2 Randomized Clinical Trial', Open Forum Infectious Diseases, 12 (2025) [C1]
Introduction: Classification of patients with Staphylococcus aureus bacteremia as complicated versus uncomplicated is based on a combination of clinical and microbiologic variable... [more]
Introduction: Classification of patients with Staphylococcus aureus bacteremia as complicated versus uncomplicated is based on a combination of clinical and microbiologic variables. Whether daily body temperature and common laboratory tests such as C-reactive protein (CRP) and white blood cell (WBC) can improve risk stratification algorithms is unclear. Methods: We conducted a post hoc secondary analysis of the CAMERA2 trial, which enrolled hospitalized adult patients with methicillin-resistant S aureus bacteremia and prospectively collected daily body temperature and peripheral blood WBC and CRP. We evaluated the prognostic relevance of each parameter by calculating crude and adjusted odds ratios for 90-day all-cause mortality comparing patients with the abnormal parameter of interest versus those with normal parameters on each day of illness. Results: A total of 345 patients were included in this analysis, of whom 63 (18.3%) died within 90 days. Fever (body temperature =38.0 °C) was associated with increased odds of 90-day mortality from day 4 and onwards. Fever later in the illness course was associated with higher adjusted odds of mortality (8.78; 95% confidence interval, 2.78-27.7 on day 7 vs adjusted odds ratio 3.70; 95% CI, 1.58-8.67 on day 4). In contrast, CRP and abnormal WBC count did not demonstrate a consistent or temporal association with mortality. Conclusions: Persistent fever after 72 hours is associated with increased mortality in patients with methicillin-resistant S aureus bacteremia, supporting recommendations that this should be kept as a criterion for classifying patients as either "high-risk"or "complicated."Within this dataset, there was limited additional predictive value in WBC or CRP.
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2025 |
Daneman N, Rishu A, Pinto R, Rogers BA, Shehabi Y, Parke R, et al., 'Antibiotic Treatment for 7 versus 14 Days in Patients with Bloodstream Infections', The New England journal of medicine, 392 1065-1078 (2025) [C1]
BACKGROUND: Bloodstream infections are associated with substantial morbidity and mortality. Early, appropriate antibiotic therapy is important, but the duration of treatment is un... [more]
BACKGROUND: Bloodstream infections are associated with substantial morbidity and mortality. Early, appropriate antibiotic therapy is important, but the duration of treatment is uncertain. METHODS: In a multicenter, noninferiority trial, we randomly assigned hospitalized patients (including patients in the intensive care unit [ICU]) who had bloodstream infection to receive antibiotic treatment for 7 days or 14 days. Antibiotic selection, dosing, and route were at the discretion of the treating team. We excluded patients with severe immunosuppression, foci requiring prolonged treatment, single cultures with possible contaminants, or cultures yielding Staphylococcus aureus. The primary outcome was death from any cause by 90 days after diagnosis of the bloodstream infection, with a noninferiority margin of 4 percentage points. RESULTS: Across 74 hospitals in seven countries, 3608 patients underwent randomization and were included in the intention-to-treat analysis; 1814 patients were assigned to 7 days of antibiotic treatment, and 1794 to 14 days. At enrollment, 55.0% of patients were in the ICU and 45.0% were on hospital wards. Infections were acquired in the community (75.4%), hospital wards (13.4%) and ICUs (11.2%). Bacteremia most commonly originated from the urinary tract (42.2%), abdomen (18.8%), lung (13.0%), vascular catheters (6.3%), and skin or soft tissue (5.2%). By 90 days, 261 patients (14.5%) receiving antibiotics for 7 days had died and 286 patients (16.1%) receiving antibiotics for 14 days had died (difference, -1.6 percentage points [95.7% confidence interval {CI}, -4.0 to 0.8]), which showed the noninferiority of the shorter treatment duration. Patients were treated for longer than the assigned duration in 23.1% of the patients in the 7-day group and in 10.7% of the patients in the 14-day group. A per-protocol analysis also showed noninferiority (difference, -2.0 percentage points [95% CI, -4.5 to 0.6]). These findings were generally consistent across secondary clinical outcomes and across prespecified subgroups defined according to patient, pathogen, and syndrome characteristics. CONCLUSIONS: Among hospitalized patients with bloodstream infection, antibiotic treatment for 7 days was noninferior to treatment for 14 days. (Funded by the Canadian Institutes of Health Research and others; BALANCE ClinicalTrials.gov number, NCT03005145.).
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2024 |
Manning L, Rofe A, Athan E, Gill SD, Yates P, Cooper D, et al., 'Patient-Reported Outcomes Following Periprosthetic Joint Infection of the Hip and Knee', Journal of Bone and Joint Surgery, 106 1197-1204 (2024)
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2024 |
Petersiel N, Davis JS, Meagher N, Price DJ, Tong SYC, Combination Antibiotics for MEthicillin Resistant Staphylococcus aureus (CAMERA2) Study Group, 'Combination of Antistaphylococcal ß-Lactam With Standard Therapy Compared to Standard Therapy Alone for the Treatment of Methicillin-Resistant Staphylococcus aureus Bacteremia: A Post Hoc Analysis of the CAMERA2 Trial Using a Desirability of Outcome Ranking Approach.', Open Forum Infect Dis, 11 ofae181 (2024) [C1]
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2024 |
Legg A, Roberts JA, Roberts MA, Cass A, Davies J, Tong SYC, Davis JS, 'Avoiding misclassification of acute kidney injury: Timing is everything.', Nephrology (Carlton), 29 100-104 (2024) [C1]
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2024 |
Hanssen JLJ, Gademan MGJ, Wouthuyzen-Bakker M, Davis JS, Dewar D, Manning L, et al., 'Global practice variation of suppressive antimicrobial treatment for prosthetic joint infections: A cross-sectional survey study', Journal of Infection, 89 (2024) [C1]
Objectives: To identify global differences in the use of suppressive antimicrobial therapy (SAT) in the management of prosthetic joint infection (PJI). Methods: An online survey w... [more]
Objectives: To identify global differences in the use of suppressive antimicrobial therapy (SAT) in the management of prosthetic joint infection (PJI). Methods: An online survey was designed to investigate clinician's approach to SAT for PJI, including indications, preferred antimicrobial drugs, dosing, treatment duration and follow-up. The survey was distributed to members of four international (bone and joint) infection societies and study groups. Results: Respondents comprised 330 physicians (204 infectious diseases specialists, 110 orthopedic surgeons, 23 clinical microbiologists) from 43 different countries (Europe, n = 134, 41%; Oceania n = 112, 34%; North America, n = 51, 16%; other, n = 33, 10%; total response rate 20%). After debridement, antibiotics and implant retention (DAIR) or one-stage revision, SAT would be initiated often or almost always by 38% of respondents from North America, but only in 6% from Europe and 7% from Oceania. First choices of SAT for staphylococcal PJI were oral cephalosporins (39%) and tetracyclines (31%) in North America; tetracyclines (27%) and anti-staphylococcal penicillins (22%) in Europe; and anti-staphylococcal penicillins (55%) in Oceania. There was no global or regional preferred SAT regimen for Gram-negative PJI. Of all respondents, dosage of SAT was never lowered (n = 126, 38%), lowered for specific antibiotics (n = 125, 38%) or lowered for all antibiotics (n = 79, 24%). SAT was prescribed for a lifelong duration (n = 43, 13%), a fixed duration (range 6 months¿3 years) (n = 104, 32%) or for an undetermined duration (n = 154, 47%). Conclusions: Approach to SAT in PJI is highly regional, with no consensus regarding the indication, selection, dose, or duration of SAT between physicians worldwide. This reflects the paucity of data and need for high quality studies to define the optimal use of SAT in the treatment of patients with PJI.
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2024 |
Varon B, Palacios-Baena ZR, de Kraker MEA, Rodríguez-Baño J, Leibovici L, Paul M, et al., 'Universal Risk Factors for Mortality in Bloodstream Infections (UNIFORM): a systematic review and Delphi survey', Clinical Microbiology and Infection, 30 453-461 (2024) [C1]
Background: Significant variations in the variables collected in clinical studies focusing on bacteraemia lead to inconsistency in the evaluation of risk factors for mortality. Ob... [more]
Background: Significant variations in the variables collected in clinical studies focusing on bacteraemia lead to inconsistency in the evaluation of risk factors for mortality. Objective: We aimed to define a minimum set of risk factors that should be assessed and reported in all studies assessing survival in bacteraemia. Study eligibility: We conducted a systematic review including observational prospective and retrospective cohort studies that assessed all-cause mortality among patients with bacteraemia. We included only studies computing an adjusted analysis for mortality, with >500 participants. Exposures: Independently significant risk factors for all-cause, preferably 30-day, mortality. Data sources: PubMed was used to identify eligible studies published between 2000 and 2020. A Delphi survey among experts was used to evaluate and prioritize the factors identified by the systematic review. Risk of bias: SIGN checklist complemented by risk of bias assessment of the adjusted analysis. Data synthesis: Definite universal risk factors were defined as those assessed in >50% of all included studies and significant in >50% of those. Potential universal risk factors were defined as those significant in >50% of studies evaluating the factor and a subgroup analysis was performed for studies of Staphylococcus aureus bacteraemia. Results: We included in the systematic review 62 studies, comprising more than 300,000 patients, from which a list of 17 risk factors was derived, whose association with all-cause mortality was statistically significant in most studies. The factors address baseline patient variables, the setting of infection acquisition, factors associated with the specific infection, the inflammatory response at onset of sepsis and management parameters where relevant. There were 14 risk factors for S. aureus bacteraemia. Conclusion: We identified a minimum set of universal factors to be collected, reported, and assessed, in all future studies evaluating factors associated with mortality in bacteraemia to improve study quality and harmonization.
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2024 |
Wang DS, Phu A, Mckee K, Strasser S, Sheils S, Weltman M, et al., 'Hepatitis C Virus Antiviral Drug Resistance and Salvage Therapy Outcomes Across Australia', OPEN FORUM INFECTIOUS DISEASES, 11 (2024) [C1]
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2024 |
Anpalagan K, Dotel R, MacFadden DR, Smith S, Voss L, Petersiel N, et al., 'Does Adjunctive Clindamycin Have a Role in Staphylococcus aureus Bacteremia? A Protocol for the Adjunctive Treatment Domain of the Staphylococcus aureus Network Adaptive Platform (SNAP) Randomized Controlled Trial', CLINICAL INFECTIOUS DISEASES, 79 626-634 (2024)
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2024 |
Isler B, Niessen N, Campbell D, Toms AD, Daneman N, Manning L, Davis JS, 'Addressing important evidence gaps in the management of prosthetic joint infection: clinician attitudes and equipoise', ANZ Journal of Surgery, 94 1211-1213 (2024) [C1]
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2024 |
Stewardson AJ, Davis JS, Dunlop AJ, Tong SYC, Matthews GV, 'How I manage severe bacterial infections in people who inject drugs.', Clin Microbiol Infect, 30 877-882 (2024) [C1]
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2024 |
Petersiel N, Giulieri S, Daniel DS, Fan S-H, Ersoy SC, Davis JS, et al., 'Genomic investigation and clinical correlates of the in vitro ß-lactam: NaHCO3 responsiveness phenotype among methicillin-resistant Staphylococcus aureus isolates from a randomized clinical trial.', Antimicrob Agents Chemother, 68 e0021824 (2024) [C1]
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2024 |
Hernández-Mitre MP, Morpeth SC, Venkatesh B, Hills TE, Davis J, Mahar RK, et al., 'TMPRSS2 inhibitors for the treatment of COVID-19 in adults: a systematic review and meta-analysis of randomized clinical trials of nafamostat and camostat mesylate', Clinical Microbiology and Infection, 30 743-754 (2024) [C1]
Background: Synthetic serine protease inhibitors block the cellular enzyme transmembrane protease serine 2, thus preventing SARS-CoV-2 cell entry. There are two relevant drugs in ... [more]
Background: Synthetic serine protease inhibitors block the cellular enzyme transmembrane protease serine 2, thus preventing SARS-CoV-2 cell entry. There are two relevant drugs in this class, namely, nafamostat (intravenous formulation) and camostat (oral formulation). Objective: To determine whether transmembrane protease serine 2 inhibition with nafamostat or camostat is associated with a reduced risk of 30-day all-cause mortality in adults with COVID-19. Data sources: Scientific databases and clinical trial registry platforms. Study eligibility criteria, interventions, and participants: Preprints or published randomized clinical trials (RCTs) of nafamostat or camostat vs. usual care or placebo in adults requiring treatment for COVID-19. Methods of data synthesis and risk-of-bias assessment: The primary outcome of the meta-analysis was 30-day all-cause mortality. Secondary outcomes included time to recovery, adverse events, and serious adverse events. Risk of bias (RoB) was assessed using the revised Cochrane RoB 2 tool for individually randomized trials. Meta-analysis was conducted in the R package meta (v7.0-0) using inverse variance and random effects. Protocol registration number was INPLASY202320120. Results: Twelve RCTs were included. Overall, the number of available patients was small (nafamostat = 387; camostat = 1061), the number of enrolled patients meeting the primary outcome was low (nafamostat = 12; camostat = 13), and heterogeneity was high. In hospitalized adults, we did not identify differences in 30-day all-cause mortality (risk ratio [95% CI]: 0.58 [0.19, 1.80], p 0.34; I2 = 0%; n = 6) and time to recovery (mean difference [95% CI]: 0.08 days [-0.74, 0.89], p 0.86; n = 2) between nafamostat vs. usual care; and for 30-day all-cause mortality (risk ratio [95% CI]: 0.99 [0.31, 3.18], p 0.99; n = 2) between camostat vs. placebo. Conclusion: The RCT evidence is inconclusive to determine whether there is a mortality reduction and safety with either nafamostat or camostat for the treatment of adults with COVID-19. There were high RoB, small sample size, and high heterogeneity between RCTs.
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2024 |
Hammat AS, Nelson R, Davis JS, Manning L, Campbell D, Solomon LB, et al., 'Estimation of two-year hospital costs of hip and knee periprosthetic joint infection treatments using activity-based costing', The Bone & Joint Journal, 106-B 1084-1092 (2024) [C1]
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2024 |
Hanson J, Radlof S, Littlejohn M, Hempenstall A, Edwards R, Nakata Y, et al., 'Hepatitis B genotypes in Aboriginal and Torres Strait Islander Australians: correlation with clinical course and implications for management.', Intern Med J, 54 647-656 (2024) [C1]
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2024 |
Sullivan RP, Bukulatjpi SM, Binks P, Hosking K, Nundhirribala P, Vintour-Cesar E, et al., '"They feel shame sometime, but that is why we need to talk to them we need to tell them how important it is not to feel shame": Hepatitis B related shame and improving hepatitis B care in Aboriginal and Torres Strait Islander communities in the Top End of the Northern Territory, according to the Aboriginal health workforce', Archives of Public Health, 82 (2024) [C1]
Background: The Aboriginal health workforce has unique insights given their healthcare experience and interactions with their communities. The aims of this project were to explore... [more]
Background: The Aboriginal health workforce has unique insights given their healthcare experience and interactions with their communities. The aims of this project were to explore their perceptions of hepatitis B related shame and ways to improve hepatitis B care in Aboriginal and Torres Strait Islander communities of Northern Territory's Top End, Australia. Methods: We conducted a qualitative study with guidance from the Menzies School of Health Research Infectious Diseases Indigenous Reference Group. The Aboriginal health workforce was asked to participate in semi-structured interviews exploring hepatitis B related shame and ways to improve hepatitis B care. Qualitative data were evaluated using reflexive thematic analysis. Results: There were fifteen semi-structured interviews with participants representing eight different communities. The experience of shame was reported by the Aboriginal health workforce to be common for individuals diagnosed with hepatitis B and comprised feelings of fear related to transmitting the virus, to being isolated, and to being at fault. Shame was mediated by poor health literacy, communication, the lack of culturally safe spaces and was perpetuated by intersecting stereotypes. Improvements in care can be achieved by utilising the Aboriginal health workforce more effectively, improving communication and the availability of culturally safe spaces, emphasising community connection, and reframing hepatitis B as a chronic condition. Conclusions: Hepatitis B related shame was an important issue and impactful in Aboriginal and Torres Strait Islander communities in the Top End of the Northern Territory. There were many facets to shame in these communities and it was mediated by several factors. The Aboriginal health workforce has emphasised several pathways to improve care and diminish the impact of shame, such as improving communication and the availability of culturally safe spaces.
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2024 |
Ong SWX, Lee TC, Fowler RA, Mahar R, Pinto RL, Rishu A, et al., 'Evaluating the impact of a SIMPlified LaYered consent process on recruitment of potential participants to the
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2024 |
Campbell AJ, Anpalagan K, Best EJ, Britton PN, Gwee A, Hatcher J, et al., 'Whole-of-Life Inclusion in Bayesian Adaptive Platform Clinical Trials', JAMA Pediatrics, 178 1066-1071 (2024) [C1]
Importance: There is a recognized unmet need for clinical trials to provide evidence-informed care for infants, children and adolescents. This Special Communication outlines the c... [more]
Importance: There is a recognized unmet need for clinical trials to provide evidence-informed care for infants, children and adolescents. This Special Communication outlines the capacity of 3 distinct trial design strategies, sequential, parallel, and a unified adult-pediatric bayesian adaptive design, to incorporate children into clinical trials and transform this current state of evidence inequity. A unified adult-pediatric whole-of-life clinical trial is demonstrated through the Staphylococcus aureus Network Adaptive Platform (SNAP) trial. Observations: Bayesian methods provide a framework for synthesizing data in the form of a probability model that can be used in the design and analysis of a clinical trial. Three trial design strategies are compared: (1) a sequential adult-pediatric bayesian approach that involves a separate, deferred pediatric trial that incorporates existing adult trial data into the analysis model to potentially reduce the pediatric trial sample size; (2) a parallel adult-pediatric bayesian trial whereby separate pediatric enrollment occurs in a parallel trial, running alongside an adult randomized clinical trial; and (3) a unified adult-pediatric bayesian adaptive design that supports the enrollment of both children and adults simultaneously in a whole-of-life bayesian adaptive randomized clinical trial. The SNAP trial whole-of-life design uses a bayesian hierarchical model that allows information sharing (also known as borrowing) between trial age groups by linking intervention effects of children and adults, thereby improving inference in both groups. Conclusion and Relevance: Bayesian hierarchical models may provide more precision for estimates of safety and efficacy of treatments in trials with heterogenous populations compared to traditional methods of analysis. They facilitate the inclusion of children in clinical trials and a shift from children deemed therapeutic orphans to the vision of no child left behind in clinical trials to ensure evidence for clinical practice exists across the life course. The SNAP trial provides an example of a bayesian adaptive whole-of-life inclusion design that enhances trial population inclusivity and diversity overall, as well as generalizability and translation of findings into clinical practice.
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2024 |
Happell B, 'The Letter', JOURNAL OF CHILD AND ADOLESCENT MENTAL HEALTH,
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2024 |
Young PJ, Devaux A, Li Q, Billot L, Davis JS, Delaney A, et al., 'Selective digestive tract decontamination in critically ill adults with acute brain injuries: a post hoc analysis of a randomized clinical trial', Intensive Care Medicine, 50 56-67 (2024) [C1]
Purpose: The aim of this study was to determine whether selective decontamination of the digestive tract (SDD) reduces in-hospital mortality in mechanically ventilated critically ... [more]
Purpose: The aim of this study was to determine whether selective decontamination of the digestive tract (SDD) reduces in-hospital mortality in mechanically ventilated critically ill adults admitted to the intensive care unit (ICU) with acute brain injuries or conditions. Methods: We carried out a post hoc analysis from a crossover, cluster randomized clinical trial. ICUs were randomly assigned to adopt or not to adopt a SDD strategy for two alternating 12-month periods, separated by a 3-month inter-period gap. Patients in the SDD group (n = 2791; 968 admitted to the ICU with an acute brain injury) received a 6-hourly application of an oral paste and administration of a gastric suspension containing colistin, tobramycin, and nystatin for the duration of mechanical ventilation, plus a 4-day course of an intravenous antibiotic with a suitable antimicrobial spectrum. Patients in the control group (n = 3191; 1093 admitted to the ICU with an acute brain injury) received standard care. The primary outcome was in-hospital mortality within 90¿days. There were four secondary clinical outcomes: death in ICU, ventilator-, ICU- and hospital-free days to day 90. Results: Of 2061 patients with acute brain injuries (mean age, 55.8¿years; 36.4% women), all completed the trial. In patients with acute brain injuries, there were 313/968 (32.3%) and 415/1093 (38%) in-hospital deaths in the SDD and standard care groups (unadjusted odds ratio [OR], 0.76, 95% confidence interval [CI] 0.63¿0.92; p = 0.004). The use of SDD was associated with statistically significant improvements in the four clinical secondary outcomes compared to standard care. There was no significant¿heterogeneity of treatment effect between patients with and without acute brain injuries (interaction p = 0.22). Conclusions: In this post hoc analysis of a randomized clinical trial in critically ill patients with acute brain injuries receiving mechanical ventilation, the use of SDD significantly reduced in-hospital mortality in patients compared to standard care without SDD. These findings require confirmation.
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2024 |
Binks P, Venkatesan S, Everitt A, Gurruwiwi GG, Dhurrkay RG, Bukulatjpi SM, et al., 'An evaluation and refinement of the "Hep B Story" app, tailored to meet the community's cultural needs', BMC HEALTH SERVICES RESEARCH, 24 (2024) [C1]
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2024 |
Hosking K, De Santis T, Vintour-Cesar E, Wilson PM, Bunn L, Garambaka Gurruwiwi G, et al., '"Putting the power back into community": A mixed methods evaluation of a chronic hepatitis B training course for the Aboriginal health workforce of Australia's Northern Territory.', PLoS One, 19 e0288577 (2024) [C1]
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2024 |
Kristensen NK, Manning L, Lange J, Davis JS, 'External Validation of the Joint-Specific Bone Involvement, Antimicrobial Options, Coverage of the Soft Tissues, and Host Status (JS-BACH) Classification for Predicting Outcome in Periprosthetic Joint Infections: A Cohort of 653 Patients', Journal of Arthroplasty, 39 2352-2356.e2 (2024) [C1]
Background: Periprosthetic joint infection (PJI) is a devastating complication in hip and knee joint arthroplasty. The "Joint-Specific Bone Involvement, Antimicrobial Options... [more]
Background: Periprosthetic joint infection (PJI) is a devastating complication in hip and knee joint arthroplasty. The "Joint-Specific Bone Involvement, Antimicrobial Options, Coverage of the Soft Tissues, and Host Status (JS-BACH)" classification system was developed in 2021 to stratify the complexity of PJI, and more importantly, to act as a tool to guide referrals to specialist centers. The "JS-BACH" classification has not been validated in an external cohort. This study aimed to do so using a large prospective cohort from Australia and New Zealand. Methods: We applied the JS-BACH classification to the Prosthetic Joint Infection in Australia and New Zealand Observational (PIANO) cohort. This prospective study of newly diagnosed PJI collected 2-year outcome data from 653 participants enrolled in 27 hospitals. The definition of PJI treatment failure at 24 months was any of the following: death, clinical or microbiological signs of infection, destination prosthesis removed, or ongoing antibiotic use. Individual cases were classified as per JS-BACH into "1: uncomplicated" (n = 268), "2: complex" (n = 330), and "3: limited options" (n = 55). This cohort was similar to the original JS-BACH population in terms of baseline characteristics. However, there was a difference in complexity, with more debridement, antibiotics, and implant retention procedures, fewer revision procedures, and a higher proportion of uncomplicated patients in the PIANO cohort. Results: The risk of treatment failure correlated strongly with the JS-BACH category, with odds ratios (95% confidence interval) for category 2 versus 1 of 1.75 (1.24 to 2.47) and for category 3 versus 1 of 7.12 (3.42 to 16.02). Conclusions: Despite the PIANO study population being less complicated than the original derivation cohort, the JS-BACH classification showed a clear association with treatment failure in this large external cohort.
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2024 |
Browning S, White NM, Raby E, Davis JS, Mitchell BG, 'Which trial do we need? Gown and glove use versus standard precautions for patients colonized or infected with methicillin-resistant Staphylococcus aureus or vancomycin-resistant Enterococcus.', Clin Microbiol Infect, 30 973-976 (2024) [C1]
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2024 |
Dulhunty JM, Brett SJ, De Waele JJ, Rajbhandari D, Billot L, Cotta MO, et al., 'Continuous vs Intermittent ß-Lactam Antibiotic Infusions in Critically Ill Patients With Sepsis: The BLING III Randomized Clinical Trial.', JAMA, 332 629-637 (2024) [C1]
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2024 |
Davis JS, Dewar D, Manning L, 'Prosthetic joint infection diagnosis in an age of changing clinical patterns of infection and new technologies', MEDICAL JOURNAL OF AUSTRALIA, 220 225-228 (2024)
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2024 |
Pais GM, Marianski S, Valdez K, Melicor RP, Liu J, Rohani R, et al., 'Flucloxacillin worsens while imipenem cilastatin protects against vancomycin-induced kidney injury in a translational rat model', British Journal of Pharmacology, 181 670-680 (2024) [C1]
Background and Purpose: Vancomycin is one of the most common clinical antibiotics, yet acute kidney injury is a major limiting factor. Common combinations of antibiotics with vanc... [more]
Background and Purpose: Vancomycin is one of the most common clinical antibiotics, yet acute kidney injury is a major limiting factor. Common combinations of antibiotics with vancomycin have been reported to worsen and improve vancomycin-induced kidney injury. We aimed to study the impact of flucloxacillin and imipenem¿cilastatin on kidney injury when combined with vancomycin in our translational rat model. Experimental Approach: Male Sprague¿Dawley rats received allometrically scaled (1) vancomycin, (2) flucloxacillin, (3) vancomycin + flucloxacillin, (4) vancomycin + imipenem¿cilastatin or (5) saline for 4 days. Kidney injury was evaluated via drug accumulation and urinary biomarkers including urinary output, kidney injury molecule-1 (KIM-1), clusterin and osteopontin. Relationships between vancomycin accumulation in the kidney and urinary kidney injury biomarkers were explored. Key Results: Urinary output increased every study day for vancomycin + flucloxacillin, but after the first dose only in the vancomycin group. In the vancomycin + flucloxacillin group, urinary KIM-1 increased on all days compared with vancomycin. In the vancomycin + imipenem¿cilastatin group, urinary KIM-1 was decreased on Days 1 and 2 compared with vancomycin. Similar trends were observed for clusterin. More vancomycin accumulated in the kidney with vancomycin + flucloxacillin compared with vancomycin and vancomycin + imipenem¿cilastatin. The accumulation of vancomycin in the kidney tissue correlated with increasing urinary KIM-1. Conclusions and Implications: Vancomycin + flucloxacillin caused more kidney injury compared with vancomycin alone and vancomycin + imipenem¿cilastatin in a translational rat model. The combination of vancomycin + imipenem¿cilastatin was nephroprotective.
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2024 |
Binks P, Ross C, Gurruwiwi GG, Wurrawilya S, Alley T, Bukulatjpi SM, et al., 'Adapting and translating the 'Hep B Story' App the right way: A transferable toolkit to develop health resources with, and for, Aboriginal people', HEALTH PROMOTION JOURNAL OF AUSTRALIA, 35 1244-1254 (2024) [C1]
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2024 |
Coussement J, Heath CH, Roberts MB, Lane RJ, Spelman T, Smibert OC, et al., 'Management, outcomes and predictors of mortality of Cryptococcus infection in patients without HIV: a multicentre study in 46 hospitals from Australia and New Zealand.', Clin Infect Dis, (2024)
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2024 |
Boettiger DC, Ord M, Ananthan P, Dennis G, Williams J, Ng S, et al., 'Gut colonisation with extended-spectrum beta-lactamase producing Enterobacteriaceae in vegetarians: A systematic review and meta-analysis', CMI Communications, 1 100007-100007 (2024) [C1]
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2024 |
Hosking K, Binks P, De Santis T, Wilson PM, Gurruwiwi GG, Bukulatjpi SM, et al., 'Evaluating a novel model of hepatitis B care, Hep B PAST, in the Northern Territory of Australia: results from a prospective, population-based study', The Lancet Regional Health - Western Pacific, 48 (2024) [C1]
Background: The Northern Territory (NT) has the highest prevalence of chronic hepatitis B (CHB) in Australia. The Hep B PAST program aims to improve health outcomes for people liv... [more]
Background: The Northern Territory (NT) has the highest prevalence of chronic hepatitis B (CHB) in Australia. The Hep B PAST program aims to improve health outcomes for people living with CHB. Methods: This mixed methods study involves First Nations peoples living in the NT. We used participatory action research principles across three steps: 1. Foundation step: establishing hepatitis B virus (HBV) status and linkage to care; 2. Capacity building: training the health workforce; 3. Supported transition to primary healthcare: implementation of the "Hub and Spoke" model and in-language resources. Analysis occurred at three time points: 1. Pre-Hep B PAST (2018); 2. Foundation step (2020); and 3. Completion of Hep B PAST (2023). Evaluation focuses on four key indicators, the number of people: 1) with documented HBV status; 2) diagnosed with CHB; 3) receiving care; and 4) receiving treatment. Findings: Hep B PAST (2018¿23) reached 40,555 people. HBV status was documented in 11% (1192/10,853), 79.2% (26,075/32,915) and 90.8% (28,675/31,588) of people at pre-Hep B PAST, foundation step, and completion respectively. An estimated 99.9% (821/822) of people were diagnosed, 86.3% (709/822) engaged in care, and 24.1% (198/822) on antiviral treatment at completion. CHB prevalence in the study population is 2.6%, decreasing from 6.1% to 0.4% in the pre- and post-vaccination cohorts. Interpretation: Hep B PAST is an effective model of care. Partner health services are exceeding elimination targets. This model could enable other countries to enhance the cascade of care and work towards eliminating HBV. Funding: National Health and Medical Research Council.
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2024 |
de Kretser D, Mora J, Bloomfield M, Campbell A, Cheng MP, Guy S, et al., 'Early Oral Antibiotic Switch in Staphylococcus aureus Bacteraemia: The Staphylococcus aureus Network Adaptive Platform (SNAP) Trial Early Oral Switch Protocol', CLINICAL INFECTIOUS DISEASES, 79 871-887 (2024)
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2024 |
Turner A, van Driel ML, Mitchell BL, Davis JS, Fielding A, Davey A, et al., 'Temporal patterns of antibiotic prescribing for sore throat, otitis media, and sinusitis: a longitudinal study of general practitioner registrars.', Fam Pract, 41 283-291 (2024) [C1]
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2023 |
Loewenthal MR, Davis JS, Dymock M, 'Correct Calculation of Confidence Interval for Proportion of Superior Comparisons Between Desirability of Outcome Ranking Scores', CLINICAL INFECTIOUS DISEASES, 76 175-176 (2023)
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2023 |
Williamson KM, Varadhan H, Taylor K, Crooks K, Brett K, Law C, et al., 'Communicable Diseases Intelligence Epidemiology of Group A Streptococcal bacteraemia in Hunter New England Local Health District, 2008 to 2019', COMMUNICABLE DISEASES INTELLIGENCE, 47 (2023) [C1]
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2023 |
Hernández-Mitre MP, Morpeth SC, Venkatesh B, Hills TE, Davis J, Mahar RK, et al., 'TMPRSS2 inhibitors for the treatment of COVID-19 in adults: a systematic review and meta-analysis of nafamostat and camostat mesylate randomised clinical trials
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2023 |
Dotel R, Gilbert GL, Hutabarat SN, Davis JS, O'Sullivan MVN, 'Effectiveness of adjunctive rifampicin for treatment of Staphylococcus aureus bacteraemia: a systematic review and meta-analysis of randomized controlled trials', JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 78 2419-2427 (2023) [C1]
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2023 |
Rogers BA, Fowler R, Harris PNA, Davis JS, Pinto RL, Dwivedi DB, et al., 'Non-inferiority trial of a shorter (7 days) compared with a longer (14 days) duration of antimicrobial therapy for the treatment of bacteraemic urinary sepsis, measured by microbiological success after the completion of therapy: a substudy protocol for the Bacteraemia Antibiotic Length Actually Needed for Clinical Effectiveness (BALANCE) multicentre randomised controlled trial', BMJ OPEN, 13 (2023)
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2023 |
Moller C, van Driel M, Davey A, Tapley A, Holliday EG, Fielding A, et al., 'Influenza presentations and use of neuraminidase inhibitors by Australian general practice registrars: a cross-sectional analysis from the ReCEnT study.', Fam Med Community Health, 11 (2023) [C1]
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2023 |
Henderson A, Cheng MP, Chew KL, Coombs GW, Davis JS, Grant JM, et al., 'A multi-site, international laboratory study to assess the performance of penicillin susceptibility testing of Staphylococcus aureus.', J Antimicrob Chemother, 78 1499-1504 (2023) [C1]
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2023 |
Billot L, Lipman J, Brett SJ, De Waele JJ, Cotta MO, Davis JS, et al., 'Corrigendum to "Statistical analysis plan for the BLING III study: a phase 3 multicentre randomised controlled trial of continuous versus intermittent ß-lactam antibiotic infusion in critically ill patients with sepsis" [Crit Care Resusc 23(3) (2021) 273 284](10.51893/2021.3.oa4))', Critical Care and Resuscitation, 25 60 (2023)
The authors regret that the following errors have been identified. 1. The trial registration should read "ClinicalTrials.gov Registry NCT03213990" not "ClinicalTria... [more]
The authors regret that the following errors have been identified. 1. The trial registration should read "ClinicalTrials.gov Registry NCT03213990" not "ClinicalTrials.gov Registry NCT03212990" (page 273).2. The "Acute Physiology and Chronic Health Evaluation (APACHE) III score" in "Adjusted analyses" (page 277) and "APACHE III score" in Table 3 (page 276) and "Subgroup analyses" (page 277) should read "Acute Physiology and Chronic Health Evaluation (APACHE) II score" and "APACHE II score", respectively. Note: the APACHE III diagnosis in Table 4 (page 277) is correct.3. Author affiliations for Stephen J Brett should read "6, 7" not "5, 6, 7".The authors would like to apologise for any inconvenience caused.
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2023 |
Toh EMC, Magin P, Davey A, Davis J, 'Letters', Australian Journal of General Practice, 52 9-9 (2023)
I WAS READING with great interest the article by Magin et al published in Australian Journal of General Practice in January¿February 2022, titled 'Evidence-based strategies f... [more]
I WAS READING with great interest the article by Magin et al published in Australian Journal of General Practice in January¿February 2022, titled 'Evidence-based strategies for better antibiotic prescribing'.1 I wanted to clarify a minor point. In the article the authors briefly mentioned a randomised controlled trial (RCT) conducted in Pakistan comparing amoxicillin versus placebo for mild-to-moderate pneumonia,2 stating that: 'a recent RCT of antibiotics versus placebo in children with mild-to-moderate pneumonia in Pakistan showed that placebo was non-inferior to antibiotics'.1 However, when I referred to the published results of the trial, it was actually the opposite. The primary outcome of treatment failure at day 3 was 4.9% for placebo and 2.6% for amoxicillin, a difference of 2.3% (95% confidence interval [CI]: 0.9, 3.7) higher in the placebo group.2 As explained by the trial investigators in their results section:2
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2023 |
Browning S, Davis JS, Mitchell BG, 'Have gloves and gowns had their day? An Australian and New Zealand practice and attitudes survey about contact precautions for MRSA and VRE colonisation', Infection, Disease and Health, 28 221-225 (2023) [C1]
Background: 'Contact precautions,' are recommended for hospitalised patients with known methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant Enter... [more]
Background: 'Contact precautions,' are recommended for hospitalised patients with known methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant Enterococci (VRE) colonisation. Despite increasing observational evidence suggesting that gowns and gloves are of no added benefit over hand hygiene and environmental cleaning, guidelines continue to recommend them. Methods: A cross-sectional online survey of infection prevention professionals, infectious diseases physicians and microbiologists in Australian and New Zealand hospitals was conducted. The purpose was to explore variations in current approaches to known MRSA and VRE colonisation, and determine clinical equipoise for a proposed randomised control trial (RCT) to withdraw the use of gowns and gloves in this setting. Results: 226 responses from 122 hospitals across all Australian jurisdiction and multiple regions of New Zealand were received. While most hospitals implement contact precautions for MRSA (86%) and VRE (92%), variations based on MRSA and VRE subtypes are common. There was strong interest in removing glove and gown use for MRSA (72% and 73%, respectively) and VRE (70% and 68%, respectively). 62% of surveyed hospitals expressed interest in participating in a proposed cluster RCT comparing discontinuation of gown and glove use as part of contact precautions for MRSA and VRE, with their ongoing use. Conclusion: The mandated use of PPE in the context of MRSA and VRE colonisation warrants further examination. An RCT is needed to definitively address this issue and to promote a widespread change in practice, if warranted.
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2023 |
Sullivan RP, Davies J, Binks P, McKinnon M, Dhurrkay RG, Hosking K, et al., 'Preventing early childhood transmission of hepatitis B in remote Aboriginal communities in northern Australia (vol 21, 186, 2022)', INTERNATIONAL JOURNAL FOR EQUITY IN HEALTH, 22 (2023)
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2023 |
Legg A, Meagher N, Johnson SA, Roberts MA, Cass A, Scheetz MH, et al., 'Risk Factors for Nephrotoxicity in Methicillin-Resistant
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2023 |
Rahardja R, Zhu M, Davis JS, Manning L, Metcalf S, Young SW, 'Success of Debridement, Antibiotics, and Implant Retention in Prosthetic Joint Infection Following Primary Total Knee Arthroplasty: Results From a Prospective Multicenter Study of 189 Cases', Journal of Arthroplasty, 38 S399-S404 (2023) [C1]
Background: This study aimed to identify the success rate of debridement, antibiotics, and implant retention (DAIR) for prosthetic joint infection (PJI) in a large prospective coh... [more]
Background: This study aimed to identify the success rate of debridement, antibiotics, and implant retention (DAIR) for prosthetic joint infection (PJI) in a large prospective cohort of patients undergoing total knee arthroplasty (TKA). The ability for different PJI classification systems to predict success was assessed. Methods: Prospective data recorded in the Prosthetic Joint Infection in Australia and New Zealand Observational study were analyzed. One hundred eighty-nine newly diagnosed knee PJIs were managed with DAIR between July 2014 and December 2017. Patients were prospectively followed up for 2 years. A strict definition of success was used, requiring the patient being alive with documented absence of infection, no ongoing antibiotics and the index prosthesis in place. Success was compared against the Coventry (early PJI =1 month), International Consensus Meeting (early =90 days), Auckland (early <1 year), and Tsukayama (early =1 month, hematogenous >1 month with <7 days symptoms, chronic >1 month with >7 days symptoms) classifications. Results: DAIR success was 45% (85/189) and was highest in early PJIs defined according to the Coventry (adjusted odds ratio [aOR] = 3.9, P = .01), the International Consensus Meeting (aOR = 3.1, P = .01), and the Auckland classifications (aOR = 2.6, P = .01). Success was lower in both hematogenous (aOR = 0.4, P = .03) and chronic infections (aOR = 0.1, P = .003). Conclusion: Time since primary TKA is an important predictor of DAIR success. Success was highest in infections occurring <1 month of the primary TKA and progressively decreased as time since the primary TKA increased.
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2023 |
Hagedoorn NN, Olijve L, Kang L, Walls T, Davis J, 'Comparison of Clinical Prediction Rules in Pre-school Aged Children with Septic Hip Arthritis Due to Different Pathogens', Journal of Pediatric Orthopaedics, 43 E608-E613 (2023) [C1]
Background: Although differentiating between transient synovitis and septic hip arthritis is challenging, clinical prediction rules such as the Kocher criteria (KC) have been show... [more]
Background: Although differentiating between transient synovitis and septic hip arthritis is challenging, clinical prediction rules such as the Kocher criteria (KC) have been shown to help with the diagnosis of septic hip arthritis in children. Their performance in septic arthritis due to less virulent pathogens such as Kingella Kingae, however is unknown. We aimed to describe the performance of these clinical prediction rules in pre-school children with septic hip arthritis due to different pathogens. We hypothesised that the number of KC or modified KC met would be lower in children with septic hip arthritis caused by K. kingae, compared to those caused by Staphylococcus aureus. Methods: In this retrospective multicentre study conducted in Australia and New Zealand between 2012-2016, we included children with confirmed septic hip arthritis due to S. aureus (n=29), K. kingae (n=20), other pathogens (n=32), and no pathogen identified (n=48). We applied the KC (temperature, weight-bearing, erythrocyte sedimentation rate, white blood cell count) and the modified KC (C-reactive protein added) and assessed their sensitivity for septic hip arthritis, using cut offs of KC = 3 and modified KC = 4. Results: The score of the KC and the modified KC was not lower in K. kingae compared to S. aureus (P=0.27, P=0.21). In addition, both the sensitivity for the KC (S. aureus 18/29 (62.1%); K. kingae 12/20 (60.0%)), and for the modified KC (S. aureus 18/29 (62.1%); K. kingae 12/20 (60.0%)) did not differ between K. kingae and S. aureus. Of all children with septic hip arthritis, the sensitivity of both the KC and modified KC were 56.6% (95%CI 47.6-65.3). Conclusions: The clinical prediction rules had comparable performance in K. kingae infections to those caused by S. aureus. Concerningly, less than 60% of the children with confirmed septic hip arthritis met the cut-off values. These prediction rules lack sensitivity to rule-out septic hip arthritis in the early assessment of pre-school aged children with acute hip pain. Level of Evidence: Level III Diagnostic.
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2023 |
Dotel R, Bowen AC, Xie O, Gibney KB, Carapetis JR, Davis JS, Tong SYC, 'Is it time for clinical trials of invasive group A and groups C and G Streptococcus infections?', Clinical Microbiology and Infection, 29 1205-1207 (2023)
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2023 |
Manning L, Allen B, Davis JS, 'Design Characteristics and Recruitment Rates for Randomized Trials of Peri-Prosthetic Joint Infection Management: A Systematic Review', Antibiotics, 12 (2023) [C1]
Prosthetic joint infections (PJI) present a major management challenge for practicing orthopedic surgeons and infectious disease physicians. There are few high-quality data to inf... [more]
Prosthetic joint infections (PJI) present a major management challenge for practicing orthopedic surgeons and infectious disease physicians. There are few high-quality data to inform treatment guidelines. The aim of this systematic review was to report the design characteristics and recruitment rates for randomized controlled trials (RCTs) of PJI management. Trials were considered eligible for inclusion if human participants were randomized to any management intervention for PJI. We searched Medline, PubMed, Embase, Web of Science, Cochrane Database, ANZ Clinical Trials Registry, ClinicalTrials.gov, and the EU Clinical Trials Register until the end of May 2023. The systematic review was registered with PROSPERO (CRD42018112646). We identified 15 published RCTs with a total of 1743 participants with PJI. The median (interquartile range [IQR]) number of successfully recruited participants was 63 (38¿140), with 0.28 (0.13¿0.96) enrolments per site per month. Only four trials (36.4%) achieved the target recruitment. All RCTs applied different primary endpoints and varying definitions of a 'good' outcome. Despite recent improvements, PJI RCTs are characterized by slow recruitment and heterogeneous endpoint assessments, which preclude synthesis in a standard meta-analytic framework. To inform international guidelines, future PJI trials should be run as multi-country trials at high-recruiting sites.
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2023 |
Legg A, Roberts MA, Davies J, Cass A, Meagher N, Sud A, et al., 'Longer-term Mortality and Kidney Outcomes of Participants in the Combination Antibiotics for Methicillin-Resistant
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2023 |
Mahar RK, McGlothlin A, Dymock M, Lee TC, Lewis RJ, Lumley T, et al., 'A blueprint for a multi-disease, multi-domain Bayesian adaptive platform trial incorporating adult and paediatric subgroups: the Staphylococcus aureus Network Adaptive Platform trial', Trials, 24 (2023) [C1]
The Staphylococcus aureus Network Adaptive Platform (SNAP) trial is a multifactorial Bayesian adaptive platform trial that aims to improve the way that S. aureus bloodstream infec... [more]
The Staphylococcus aureus Network Adaptive Platform (SNAP) trial is a multifactorial Bayesian adaptive platform trial that aims to improve the way that S. aureus bloodstream infection, a globally common and severe infectious disease, is treated. In a world first, the SNAP trial will simultaneously investigate the effects of multiple intervention modalities within multiple groups of participants with different forms of S. aureus bloodstream infection. Here, we formalise the trial structure, modelling approach, and decision rules that will be used for the SNAP trial. By summarising the statistical principles governing the design, our hope is that the SNAP trial will serve as an adaptable template that can be used to improve comparative effectiveness research efficiency in other disease areas. Trial registration NCT05137119 . Registered on 30 November 2021.
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2023 |
McQuilten ZK, Venkatesh B, Jha V, Roberts J, Morpeth SC, Totterdell JA, et al., 'Anticoagulation Strategies in Non-Critically Ill Patients with Covid-19.', NEJM evidence, 2 EVIDoa2200293 (2023) [C1]
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2023 |
Morpeth SC, Venkatesh B, Totterdell JA, McPhee GM, Mahar RK, Jones M, et al., 'A Randomized Trial of Nafamostat for Covid-19.', NEJM evidence, 2 EVIDoa2300132 (2023) [C1]
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2023 |
O'Hern JM, Koenen AK, Janson SE, Hajkowicz KW, Robertson I, Kidd SS, et al., 'Epidemiology, management and outcomes of
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2023 |
Giulieri SG, Guérillot R, Holmes NE, Baines SL, Hachani A, Hayes AS, et al., 'A statistical genomics framework to trace bacterial genomic predictors of clinical outcomes in Staphylococcus aureus bacteremia.', Cell Rep, 42 113069 (2023) [C1]
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2023 |
Legg A, Davis JS, Roberts JA, 'Optimal drug therapy for Staphylococcus aureus bacteraemia in adults.', Curr Opin Crit Care, 29 446-456 (2023) [C1]
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2023 |
Legg A, Meagher N, Johnson SA, Roberts MA, Cass A, Scheetz MH, et al., 'Risk Factors for Nephrotoxicity in Methicillin-Resistant Staphylococcus aureus Bacteraemia: A Post Hoc Analysis of the CAMERA2 Trial', Clinical Drug Investigation, 43 23-33 (2023) [C1]
Background: Clinical risk factors for nephrotoxicity in Staphylococcus aureus bacteraemia remain largely undetermined, despite its common occurrence and clinical significance. In ... [more]
Background: Clinical risk factors for nephrotoxicity in Staphylococcus aureus bacteraemia remain largely undetermined, despite its common occurrence and clinical significance. In an international, multicentre, prospective clinical trial (CAMERA2), which compared standard therapy (vancomycin monotherapy) to combination therapy (adding an anti-staphylococcal beta-lactam) for methicillin-resistant S. aureus bacteraemia, significantly more people in the combination therapy arm experienced acute kidney injury compared with those in the monotherapy arm (23% vs 6%). Objective: The aim of this post hoc analysis was to explore in greater depth the risk factors for acute kidney injury from the CAMERA2 trial. Methods: Among participants of the CAMERA2 trial, demographic-related, infection-related and treatment-related risk factors were assessed for their relationship with acute kidney injury by univariable and multivariable logistic regression. Acute kidney injury was defined by a modified-KDIGO (Kidney Disease: Improving Global Outcomes) criteria (not including urinary output). Results: Of the 266 participants included, age (p = 0.04), randomisation to combination therapy (p = 0.002), vancomycin area under the concentration¿time curve (p = 0.03) and receipt of (flu)cloxacillin as the companion beta-lactam (p < 0.001) were significantly associated with acute kidney injury. On a multivariable analysis, concurrent use of (flu)cloxacillin increased the risk of acute kidney injury over four times compared with the use of cefazolin or no beta-lactam. The association of vancomycin area under the concentration¿time curve with acute kidney injury also persisted in the multivariable model. Conclusions: For participants receiving vancomycin for S. aureus bacteraemia, use of (flu)cloxacillin and increased vancomycin area under the concentration¿time curve were risk factors for acute kidney injury. These represent potentially modifiable risk factors for nephrotoxicity and highlight the importance of avoiding the use of concurrent nephrotoxins.
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2023 |
Hosking K, De Santis T, Vintour-Cesar E, Wilson PM, Bunn L, Gurruwiwi GG, et al., '"The most culturally safe training I've ever had": the co-design of a culturally safe Managing hepatitis B training course with and for the Aboriginal health workforce of the Northern Territory of Australia', BMC Health Services Research, 23 (2023) [C1]
Background: The Aboriginal health workforce provide responsive, culturally safe health care. We aimed to co-design a culturally safe course with and for the Aboriginal health work... [more]
Background: The Aboriginal health workforce provide responsive, culturally safe health care. We aimed to co-design a culturally safe course with and for the Aboriginal health workforce. We describe the factors which led to the successful co-design, delivery, and evaluation of the "Managing hepatitis B" course for the Aboriginal health workforce. Methods: A Participatory Action Research approach was used, involving ongoing consultation to iteratively co-design and then develop course content, materials, and evaluation tools. An Aboriginal and Torres Strait Islander research and teaching team received education in chronic hepatitis B and teaching methodologies. Pilot courses were held, in remote communities of the Northern Territory, using two-way learning and teach-back methods to further develop the course and assess acceptability and learnings. Data collection involved focus group discussions, in-class observations, reflective analysis, and use of co-designed and assessed evaluation tools. Results: Twenty-six participants attended the pilot courses. Aboriginal and Torres Strait Islander facilitators delivered a high proportion of the course. Evaluations demonstrated high course acceptability, cultural safety, and learnings. Key elements contributing to success and acceptability were acknowledging, respecting, and integrating cultural differences into education, delivering messaging and key concepts through an Aboriginal and Torres Strait Islander lens, using culturally appropriate approaches to learning including storytelling and visual teaching methodologies. Evaluation of culturally safe frameworks and findings from the co-design process led to the creation of a conceptual framework, underpinned by meeting people's basic needs, and offering a safe and comfortable environment to enable productive learning with attention to the following: sustenance, financial security, cultural obligations, and gender and kinship relationships. Conclusions: Co-designed education for the Aboriginal health workforce must embed principles of cultural safety and meaningful community consultation to enable an increase in knowledge and empowerment. The findings of this research can be used to guide the design of future health education for First Nations health professionals and to other non-dominant cultures. The course model has been successfully transferred to other health issues in the Northern Territory.
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2023 |
Anagnostou N, Archuleta S, Athan E, Barina L, Best E, Bloomfield M, et al., 'The
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2023 |
Barber BE, White H, Poole AP, Davis JS, McGloughlin SA, Turner T, 'Australian National Clinical Evidence Taskforce COVID-19 drug treatment guidelines: challenges of producing a living guideline', MEDICAL JOURNAL OF AUSTRALIA, 219 197-199 (2023)
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Nova |
2023 |
Coussement J, Heath CH, Roberts MB, Lane RJ, Spelman T, Smibert OC, et al., 'Current Epidemiology and Clinical Features of Cryptococcus Infection in Patients Without Human Immunodeficiency Virus: A Multicenter Study in 46 Hospitals in Australia and New Zealand.', Clin Infect Dis, 77 976-986 (2023) [C1]
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2023 |
Ong SWX, Petersiel N, Loewenthal MR, Daneman N, Tong SYC, Davis JS, 'Unlocking the DOOR-how to design, apply, analyse, and interpret desirability of outcome ranking endpoints in infectious diseases clinical trials.', Clin Microbiol Infect, 29 1024-1030 (2023) [C1]
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Nova |
2023 |
Murphy NJ, Davis JS, Tarrant SM, Balogh ZJ, 'Common orthopaedic trauma may explain 31,000-year-old remains', NATURE, 615 E13-E14 (2023)
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2022 |
Spellberg B, Aggrey G, Brennan MB, Footer B, Forrest G, Hamilton F, et al., 'Use of Novel Strategies to Develop Guidelines for Management of Pyogenic Osteomyelitis in Adults: A WikiGuidelines Group Consensus Statement', JAMA Network Open, E2211321 (2022) [C1]
Importance: Traditional approaches to practice guidelines frequently result in dissociation between strength of recommendation and quality of evidence. Objective: To construct a c... [more]
Importance: Traditional approaches to practice guidelines frequently result in dissociation between strength of recommendation and quality of evidence. Objective: To construct a clinical guideline for pyogenic osteomyelitis management, with a new standard of evidence to resolve the gap between strength of recommendation and quality of evidence, through the use of a novel open access approach utilizing social media tools. Evidence Review: This consensus statement and systematic review study used a novel approach from the WikiGuidelines Group, an open access collaborative research project, to construct clinical guidelines for pyogenic osteomyelitis. In June 2021 and February 2022, authors recruited via social media conducted multiple PubMed literature searches, including all years and languages, regarding osteomyelitis management; criteria for article quality and inclusion were specified in the group's charter. The GRADE system for evaluating evidence was not used based on previously published concerns regarding the potential dissociation between strength of recommendation and quality of evidence. Instead, the charter required that clear recommendations be made only when reproducible, prospective, controlled studies provided hypothesis-confirming evidence. In the absence of such data, clinical reviews were drafted to discuss pros and cons of care choices. Both clear recommendations and clinical reviews were planned with the intention to be regularly updated as new data become available. Findings: Sixty-three participants with diverse expertise from 8 countries developed the group's charter and its first guideline on pyogenic osteomyelitis. These participants included both nonacademic and academic physicians and pharmacists specializing in general internal medicine or hospital medicine, infectious diseases, orthopedic surgery, pharmacology, and medical microbiology. Of the 7 questions addressed in the guideline, 2 clear recommendations were offered for the use of oral antibiotic therapy and the duration of therapy. In addition, 5 clinical reviews were authored addressing diagnosis, approaches to osteomyelitis underlying a pressure ulcer, timing for the administration of empirical therapy, specific antimicrobial options (including empirical regimens, use of antimicrobials targeting resistant pathogens, the role of bone penetration, and the use of rifampin as adjunctive therapy), and the role of biomarkers and imaging to assess responses to therapy. Conclusions and Relevance: The WikiGuidelines approach offers a novel methodology for clinical guideline development that precludes recommendations based on low-quality data or opinion. The primary limitation is the need for more rigorous clinical investigations, enabling additional clear recommendations for clinical questions currently unresolved by high-quality data..
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2022 |
Campbell AJ, Dotel R, Braddick M, Britton PN, Eisen DP, Francis JR, et al., 'Clindamycin adjunctive therapy for severe Staphylococcus aureus treatment evaluation (CASSETTE)-an open-labelled pilot randomized controlled trial.', JAC Antimicrob Resist, 4 dlac014 (2022) [C1]
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Nova |
2022 |
Denholm JT, Venkatesh B, Davis J, Bowen AC, Hammond NE, Jha V, et al., 'ASCOT ADAPT study of COVID-19 therapeutics in hospitalised patients: an international multicentre adaptive platform trial', TRIALS, 23 (2022)
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2022 |
Davis JS, Metcalf S, Clark B, Robinson JO, Huggan P, Luey C, et al., 'Predictors of Treatment Success After Periprosthetic Joint Infection: 24-Month Follow up From a Multicenter Prospective Observational Cohort Study of 653 Patients.', Open Forum Infect Dis, 9 ofac048 (2022) [C1]
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Nova |
2022 |
Davis JS, Metcalf S, Paterson DL, Robinson JO, Clarke B, Manning L, 'Proposed empiric antibiotic therapy for prosthetic joint infections: an analysis of the Prosthetic Joint Infection in Australia and New Zealand, Observational (PIANO) cohort.', Intern Med J, 52 322-325 (2022) [C1]
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Nova |
2022 |
Giulieri SG, Guerillot R, Duchene S, Hachani A, Daniel D, Seemann T, et al., 'Niche-specific genome degradation and convergent evolution shaping
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2022 |
Symons TJ, Straiton N, Gagnon R, Littleford R, Campbell AJ, Bowen AC, et al., 'Consumer perspectives on simplified, layered consent for a low risk, but complex pragmatic trial', Trials, 23 (2022) [C1]
Background: For decades, the research community has called for participant information sheets/consent forms (PICFs) to be improved. Recommendations include simplifying content, re... [more]
Background: For decades, the research community has called for participant information sheets/consent forms (PICFs) to be improved. Recommendations include simplifying content, reducing length, presenting information in layers and using multimedia. However, there are relatively few studies that have evaluated health consumers' (patients/carers) perspectives on the type and organisation of information, and the level of detail to be included in a PICF to optimise an informed decision to enter a trial. We aimed to elicit consumers' views on a layered approach to consent that provides the key information for decision-making in a short PICF (layer 1) with additional optional information that is accessed separately (layer 2). We also elicited consumers' views on the optimal content and layout of the layered consent materials for a large and complex Bayesian adaptive platform trial (the SNAP trial). Methods: We conducted a qualitative multicentre study (4 focus groups and 2 semi-structured interviews) involving adolescent and adult survivors of Staphylococcus aureus bloodstream infection (22) and their carers (2). Interview transcripts were examined using inductive thematic analysis. Results: Consumers supported a layered approach to consent. The primary theme that emerged was the value of agency; the ability to exert some control over the amount of information read before the consent form is signed. Three other themes emerged; the need to prioritise participants' information needs; the importance of health literacy; the importance of information about a trial's benefits (over its risks) for decision-making and the interplay between the two. Conclusions: Our findings suggest that consumers may challenge the one-size-fits-all approach currently applied to the development of PICFs in countries like Australia. Consumers supported a layered approach to consent that offers choice in the amount of information to be read before deciding whether to enter a trial. A 3-page PICF was considered sufficient for decision-making for the SNAP trial, provided that further information was available and accessible.
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Nova |
2022 |
Davis JS, Petersiel N, Tong SYC, 'How I manage a patient with MRSA bacteraemia', CLINICAL MICROBIOLOGY AND INFECTION, 28 190-194 (2022)
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2022 |
Lechner-Scott JS, Davis JS, Hawkes C, Giovannoni G, Levy M, Yeh A, 'Vaccine hesitancy in people with multiple sclerosis', MULTIPLE SCLEROSIS AND RELATED DISORDERS, 65 (2022)
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2022 |
Johns BP, Dewar DC, Loewenthal MR, Manning LA, Atrey A, Atri N, et al., 'A desirability of outcome ranking (DOOR) for periprosthetic joint infection - a Delphi analysis', Journal of Bone and Joint Infection, 7 221-229 (2022) [C1]
Background: Treatment outcomes in studies on prosthetic joint infection are generally assessed using a dichotomous outcome relating to treatment success or failure. These outcome ... [more]
Background: Treatment outcomes in studies on prosthetic joint infection are generally assessed using a dichotomous outcome relating to treatment success or failure. These outcome measures neither include patient-centred outcome measures including joint function and quality of life, nor do they account for adverse effects of treatment. A desirability of outcome ranking (DOOR) measure can include these factors and has previously been proposed and validated for other serious infections. We aimed to develop a novel DOOR for prosthetic joint infections (PJIs). Methods: The Delphi method was used to develop a DOOR for PJI research. An international working group of 18 clinicians (orthopaedic surgeons and infectious disease specialists) completed the Delphi process. The final DOOR comprised the dimensions established to be most important by consensus with >75 % of participant agreement. Results: The consensus DOOR comprised four main dimensions. The primary dimension was patient-reported joint function. The secondary dimensions were infection cure and mortality. The final dimension of quality of life was selected as a tie-breaker. Discussion: A desirability of outcome ranking for periprosthetic joint infection has been proposed. It focuses on patient-centric outcome measures of joint function, cure and quality of life. This DOOR provides a multidimensional assessment to comprehensively rank outcomes when comparing treatments for prosthetic joint infection.
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Nova |
2022 |
McKenzie CRL, Davis J, Dunlop AJ, 'E-cigarette or vaping product use-associated lung injury in an adolescent', MEDICAL JOURNAL OF AUSTRALIA, 216 (2022)
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2022 |
Davis JS, Kang LX, Manning L, Dewar D, 'Clinician-driven research priorities in bone and joint infection: perspectives of orthopaedic surgeons and infectious diseases physicians', ANZ JOURNAL OF SURGERY, 92 2790-2792 (2022)
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2022 |
Baillie EJ, Merlo G, Magin P, Tapley A, Mulquiney KJ, Davis JS, et al., 'Antibiotic prescribing for upper respiratory tract infections and acute bronchitis: a longitudinal analysis of general practitioner trainees', FAMILY PRACTICE, 39 1063-1069 (2022) [C1]
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Nova |
2022 |
Manning L, Metcalf S, Dymock M, Robinson O, Clark B, Nelson R, et al., 'Short- versus standard-course intravenous antibiotics for peri-prosthetic joint infections managed with debridement and implant retention: a randomised pilot trial using a desirability of outcome ranking (DOOR) endpoint', International Journal of Antimicrobial Agents, 60 (2022) [C1]
Background: Peri-prosthetic joint infection (PJI) is a devastating complication of joint replacement surgery. Determining the optimal duration of intravenous (IV) antibiotics for ... [more]
Background: Peri-prosthetic joint infection (PJI) is a devastating complication of joint replacement surgery. Determining the optimal duration of intravenous (IV) antibiotics for PJI managed with debridement and implant retention (DAIR) is a research priority. Methods: Patients undergoing DAIR for early and late-acute PJI of the hip or knee were randomised to receive 2 (short-course) or 6 (standard-course) weeks of IV antibiotics, with both groups completing 12 weeks of antibiotics in total. The primary endpoint of this pilot, open-label, randomised trial was a 7-point ordinal desirability of outcome ranking (DOOR) score, which accounted for mortality, clinical cure and treatment adverse events at 12 months. Duration of IV treatment was used as a tiebreaker, with shorter courses ranked higher. Outcome adjudication was performed by expert clinicians blinded to the allocated intervention (Australia and New Zealand Clinical Trials Registry ACTRN12617000127303). Results: 60 patients were recruited; 31 and 29 were allocated to short- and standard-course treatment, respectively. All had an evaluable outcome at 12 months and were analysed by intention-to-treat. Clinical cure was demonstrated in 44 (73%) overall; 22 (71%) in the short-course group and 22 (76%) in the standard-care group (P=0.77). Using the DOOR approach, the probability that short- was better than standard-course treatment was 59.7% (95% confidence interval 45.1-74.3). Conclusions: In selected patients with early and late-acute PJI managed with DAIR, shorter courses of IV antibiotics may be appropriate. Due to small sample size, these data accord with, but do not confirm, results from other international trials of early transition to oral antibiotics.
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Nova |
2022 |
SuDDICU Investigators for the Australian and New Zealand Intensive Care Society Clinical Trials Group, Myburgh JA, Seppelt IM, Goodman F, Billot L, Correa M, et al., 'Effect of Selective Decontamination of the Digestive Tract on Hospital Mortality in Critically Ill Patients Receiving Mechanical Ventilation: A Randomized Clinical Trial.', JAMA, 328 1911-1921 (2022) [C1]
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Nova |
2022 |
Sinagra ZP, Davis JS, Lorimer M, de Steiger RN, Graves SE, Yates P, Manning L, 'The accuracy of reporting of periprosthetic joint infection to the Australian Orthopaedic Association National Joint Replacement Registry', Bone and Joint Open, 3 367-374 (2022) [C1]
Aims National joint registries under-report revisions for periprosthetic joint infection (PJI). We aimed to validate PJI reporting to the Australian Orthopaedic Association Nation... [more]
Aims National joint registries under-report revisions for periprosthetic joint infection (PJI). We aimed to validate PJI reporting to the Australian Orthopaedic Association National Joint Arthroplasty Registry (AOANJRR) and the factors associated with its accuracy. We then applied these data to refine estimates of the total national burden of PJI. Methods A total of 561 Australian cases of confirmed PJI were captured by a large, prospective observational study, and matched to data available for the same patients through the AOANJRR. Results In all, 501 (89.3%) cases of PJI recruited to the prospective observational study were successfully matched with the AOANJRR database. Of these, 376 (75.0%) were captured by the registry, while 125 (25.0%) did not have a revision or reoperation for PJI recorded. In a multivariate logistic regression analysis, early (within 30 days of implantation) PJIs were less likely to be reported (adjusted odds ratio (OR) 0.56; 95% confidence interval (CI) 0.34 to 0.93; p = 0.020), while two-stage revision procedures were more likely to be reported as a PJI to the registry (OR 5.3 (95% CI 2.37 to 14.0); p = 0.001) than debridement and implant retention or other surgical procedures. Based on this data, the true estimate of the incidence of PJI in Australia is up to 3,900 cases per year. Conclusion In Australia, infection was not recorded as the indication for revision or reoperation in one-quarter of those with confirmed PJI. This is better than in other registries, but suggests that registry-captured estimates of the total national burden of PJI are underestimated by at least one-third. Inconsistent PJI reporting is multifactorial but could be improved by developing a nested PJI registry embedded within the national arthroplasty registry.
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2022 |
Sullivan RP, Davies J, Binks P, McKinnon M, Dhurrkay RG, Hosking K, et al., 'Preventing early childhood transmission of hepatitis B in remote aboriginal communities in Northern Australia', INTERNATIONAL JOURNAL FOR EQUITY IN HEALTH, 21 (2022) [C1]
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2022 |
Lee IR, Tong SYC, Davis JS, Paterson DL, Syed-Omar SF, Peck KR, et al., 'Early oral stepdown antibiotic therapy versus continuing intravenous therapy for uncomplicated Gram-negative bacteraemia (the INVEST trial): study protocol for a multicentre, randomised controlled, open-label, phase III, non-inferiority trial', Trials, 23 (2022)
Background: The incidence of Gram-negative bacteraemia is rising globally and remains a major cause of morbidity and mortality. The majority of patients with Gram-negative bactera... [more]
Background: The incidence of Gram-negative bacteraemia is rising globally and remains a major cause of morbidity and mortality. The majority of patients with Gram-negative bacteraemia initially receive intravenous (IV) antibiotic therapy. However, it remains unclear whether patients can step down to oral antibiotics after appropriate clinical response has been observed without compromising outcomes. Compared with IV therapy, oral therapy eliminates the risk of catheter-associated adverse events, enhances patient quality of life and reduces healthcare costs. As current management of Gram-negative bacteraemia entails a duration of IV therapy with limited evidence to guide oral conversion, we aim to evaluate the clinical efficacy and economic impact of early stepdown to oral antibiotics. Methods: This is an international, multicentre, randomised controlled, open-label, phase III, non-inferiority trial. To be eligible, adult participants must be clinically stable / non-critically ill inpatients with uncomplicated Gram-negative bacteraemia. Randomisation to the intervention or standard arms will be performed with 1:1 allocation ratio. Participants randomised to the intervention arm (within 72 h from index blood culture collection) will be immediately switched to an oral fluoroquinolone or trimethoprim-sulfamethoxazole. Participants randomised to the standard arm will continue to receive IV therapy for at least 24 h post-randomisation before clinical re-assessment and decision-making by the treating doctor. The recommended treatment duration is 7 days of active antibiotics (including empiric therapy), although treatment regimen may be longer than 7 days if clinically indicated. Primary outcome is 30-day all-cause mortality, and the key secondary outcome is health economic evaluation, including estimation of total healthcare cost as well as assessment of patient quality of life and number of quality-adjusted life years saved. Assuming a 30-day mortality of 8% in the standard and intervention arms, with 6% non-inferiority margin, the target sample size is 720 participants which provides 80% power with a one-sided 0.025 a-level after adjustment for 5% drop-out. Discussion: A finding of non-inferiority in efficacy of oral fluoroquinolones or trimethoprim-sulfamethoxazole versus IV standard of care antibiotics may hypothetically translate to wider adoption of a more cost-effective treatment strategy with better quality of life outcomes. Trial registration: ClinicalTrials.govNCT05199324. Registered 20 January 2022.
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2022 |
Browning S, Loewenthal MR, Freelander I, Dobson PM, Schneider K, Davis JS, 'Safety of prolonged outpatient courses of intravenous antibiotics: a prospective cohort study.', Clin Microbiol Infect, 28 832-837 (2022) [C1]
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Nova |
2022 |
Tong SYC, Mora J, Bowen AC, Cheng MP, Daneman N, Goodman AL, et al., 'The Staphylococcus aureus Network Adaptive Platform Trial Protocol: New Tools for an Old Foe', CLINICAL INFECTIOUS DISEASES, 75 2027-2034 (2022)
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2022 |
White H, McDonald SJ, Barber B, Davis J, Burr L, Nair P, et al., 'Care for adults with COVID-19: living guidelines from the National COVID-19 Clinical Evidence Taskforce', Medical Journal of Australia, 217 368-378 (2022)
Introduction: The Australian National COVID-19 Clinical Evidence Taskforce was established in March 2020 to maintain up-to-date recommendations for the treatment of people with co... [more]
Introduction: The Australian National COVID-19 Clinical Evidence Taskforce was established in March 2020 to maintain up-to-date recommendations for the treatment of people with coronavirus disease 2019 (COVID-19). The original guideline (April 2020) has been continuously updated and expanded from nine to 176 recommendations, facilitated by the rapid identification, appraisal, and analysis of clinical trial findings and subsequent review by expert panels. Main recommendations: In this article, we describe the recommendations for treating non-pregnant adults with COVID-19, as current on 1 August 2022 (version 61.0). The Taskforce has made specific recommendations for adults with severe/critical or mild disease, including definitions of disease severity, recommendations for therapy, COVID-19 prophylaxis, respiratory support, and supportive care. Changes in management as a result of the guideline: The Taskforce currently recommends eight drug treatments for people with COVID-19 who do not require supplemental oxygen (inhaled corticosteroids, casirivimab/imdevimab, molnupiravir, nirmatrelvir/ritonavir, regdanvimab, remdesivir, sotrovimab, tixagevimab/cilgavimab) and six for those who require supplemental oxygen (systemic corticosteroids, remdesivir, tocilizumab, sarilumab, baricitinib, casirivimab/imdevimab). Based on evidence of their achieving no or only limited benefit, ten drug treatments or treatment combinations are not recommended; an additional 42 drug treatments should only be used in the context of randomised trials. Additional recommendations include support for the use of continuous positive airway pressure, prone positioning, and endotracheal intubation in patients whose condition is deteriorating, and prophylactic anticoagulation for preventing venous thromboembolism. The latest updates and full recommendations are available at www.covid19evidence.net.au.
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2022 |
Dyda A, McGregor S, Binks P, Davies J, Tong SY, Krause V, et al., 'Hepatitis B prevalence in women giving birth in the Northern Territory, Australia, 2005-2015', Communicable diseases intelligence (2018), 46 (2022) [C1]
Background: Hepatitis B virus (HBV) vaccination in the Northern Territory (NT) was funded for all Aboriginal and Torres Strait Islander newborns in 1988 and for all newborns in 19... [more]
Background: Hepatitis B virus (HBV) vaccination in the Northern Territory (NT) was funded for all Aboriginal and Torres Strait Islander newborns in 1988 and for all newborns in 1990. The prevalence of HBV in the Northern Territory was found to be higher in Aboriginal and Torres Strait Islander women than in non-Indigenous women across 2005-2010. We examined more recent data to assess whether the gap remains. Methods: We linked data from two routinely collected registries, the NT Perinatal Register and the NT Notifiable Diseases System, to investigate the prevalence of HBV infection, according to eligibility for infant HBV vaccination, in women giving birth during 2005-2015. Results: There were 22,781 women recorded as giving birth in public hospitals in the Northern Territory during 2005-2015. Hepatitis B virus prevalence was highest in Aboriginal and Torres Strait Islander (1.8%) and overseas-born women (1.8%). Among Aboriginal and Torres Strait Islander women, estimated hepatitis B virus prevalence was significantly higher in those born before the implementation of the vaccination program than in those born afterwards (2.4% versus 0.3%). Prevalence was highest amongst those living in very remote areas, both overall (2.2%) and within the birth cohort eligible for HBV vaccination. Conclusions: Hepatitis B virus prevalence in Northern Territory Aboriginal and Torres Strait Islander women appears to be declining as more individuals vaccinated as part of infant vaccination programs reach adulthood. Prevalence remains highest in remote areas, highlighting the importance of ongoing monitoring and of promoting vaccination in these regions.
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2022 |
Symons T, Davis JS, 'Creating concise and readable patient information sheets for interventional studies in Australia: are we there yet?', TRIALS, 23 (2022) [C1]
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2022 |
Magin P, Davey AR, Davis J, 'Evidence-based strategies for better antibiotic prescribing', Australian Journal of General Practice, 51 21-24 (2022) [C1]
Background Antibiotic resistance is a key global health threat, and antibiotic overuse is a significant contributing factor. Antibiotic stewardship is a vital issue for general pr... [more]
Background Antibiotic resistance is a key global health threat, and antibiotic overuse is a significant contributing factor. Antibiotic stewardship is a vital issue for general practice. Objective The aim of this article is to discuss evidence-based strategies for general practitioners (GPs) and general practices to contribute to antibiotic stewardship and, thus, reduce the overall burden of antibiotic prescribing in the community. Discussion For individual GPs, and for practices, there is good evidence for the effectiveness of several strategies. As well as having a firm grasp of the clinical evidence in the area, important strategies for GPs include: eliciting and exploring patient understanding and expectations, and incorporating these in communication and management; offering delayed prescribing; using appropriate non-antibiotic symptomatic management; and, when prescribing antibiotics, doing so only for genuine clinical indications, with the appropriate antibiotic, at the appropriate dose, for the shortest appropriate duration. Practices can adopt a practice culture and practicewide prescribing policies that promote antibiotic stewardship.
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Nova |
2022 |
Browning S, Manning L, Metcalf S, Paterson DL, Robinson JO, Clark B, Davis JS, 'Characteristics and outcomes of culture-negative prosthetic joint infections from the Prosthetic Joint Infection in Australia and New Zealand Observational (PIANO) cohort study', Journal of Bone and Joint Infection, 7 203-211 (2022) [C1]
Introduction: Culture-negative (CN) prosthetic joint infections (PJIs) account for approximately 10% of all PJIs and present significant challenges for clinicians.We aimed to expl... [more]
Introduction: Culture-negative (CN) prosthetic joint infections (PJIs) account for approximately 10% of all PJIs and present significant challenges for clinicians.We aimed to explore the significance of CN PJIs within a large prospective cohort study, comparing their characteristics and outcomes with culture-positive (CP) cases. Methods: The Prosthetic joint Infection in Australia and New Zealand Observational (PIANO) study is a prospective, multicentre observational cohort study that was conducted at 27 hospitals between 2014 and 2017. We compared baseline characteristics and outcomes of all patients with CN PJI from the PIANO cohort with those of CP cases. We report on PJI diagnostic criteria in the CN cohort and apply internationally recognized PJI diagnostic guidelines to determine optimal CN PJI detection methods. Results: Of the 650 patients with 24-month outcome data available, 55 (8.5 %) were CN and 595 were CP. Compared with the CP cohort, CN patients were more likely to be female (32 (58.2 %) vs. 245 (41.2 %); p D0.016), involve the shoulder joint (5 (9.1 %) vs. 16 (2.7 %); p =0.026), and have a lower mean C-reactive protein (142 mg L-1 vs. 187 mg L-1; p =0.016). Overall, outcomes were superior in CN patients, with culture negativity an independent predictor of treatment success at 24 months (adjusted odds ratio, aOR, of 3.78 and 95%CI of 1.65-8.67). Suboptimal diagnostic sampling was common in both cohorts, with CN PJI case detection enhanced using the Infectious Diseases Society of America PJI diagnostic guidelines. Conclusions: Current PJI diagnostic guidelines vary substantially in their ability to detect CN PJI, with comprehensive diagnostic sampling necessary to achieve diagnostic certainty. Definitive surgical management strategies should be determined by careful assessment of infection type, rather than by culture status alone.
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2021 |
Tong SYC, Davis JS, 'Combination Therapy for Staphylococcus aureus Bacteremia: Hopes Dashed Again', CLINICAL INFECTIOUS DISEASES, 72 E204-E205 (2021)
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2021 |
Qama A, Allard N, Cowie B, Davis JS, Davies J, 'Hepatitis B in the Northern Territory: insights into the changing epidemiology of an ancient condition', Internal Medicine Journal, 51 910-922 (2021) [C1]
Background: Aboriginal and Torres Strait Islander people are disproportionately affected by hepatitis B virus (HBV) infection. A proposed mismatch between standard vaccines and th... [more]
Background: Aboriginal and Torres Strait Islander people are disproportionately affected by hepatitis B virus (HBV) infection. A proposed mismatch between standard vaccines and the HBV/C4 sub-genotype prevalent in Aboriginal people in the Northern Territory (NT) may reduce vaccine effectiveness. Aims: To determine HBV prevalence in the NT by Indigenous status and to explore patterns of immunity following implementation of universal vaccination, using a large longitudinal diagnostic dataset. Methods: A retrospective analysis of all available HBV serology results in the NT from 1991 to 2011 was conducted, with HBV prevalence and vaccination status analysed according to adigenous status, age and sex using individuals' patterns of HBsAg, anti-HBs and anti-HBc serology over repeated tests. Results: 100 790 individuals were tested (33.4% Indigenous) between 1991 and 2011 (26.1% of the 2011 NT population), with a total of 211 802 tests performed. In 2011, the proportion of HBV positive individuals in the NT was 3.17% (5.22% in Indigenous populations) compared to previous 2011 estimates of 1.70% (3.70% in Indigenous populations). The vaccine failure rate was lower than expected with only one presumed vaccinated person subsequently developing HBsAg positivity (0.02%). Evidence of suboptimal vaccine efficacy by breakthrough anti-HBc positivity in vaccinated individuals was demonstrated in 3.1% of the vaccinated cohort, of which 86.4% identified as Indigenous (HR 1.17). No difference in HBeAg positivity or seroconversion was observed between Indigenous and non-Indigenous individuals living with CHB. Conclusions: The burden of CHB in Indigenous people in the NT has previously been underestimated. A higher HBV prevalence in the NT than described in previous cross-sectional studies was found, including a higher prevalence in Indigenous people. Evidence of suboptimal vaccine efficacy was demonstrated predominantly in Indigenous individuals.
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2021 |
Sullivan RP, Baird R, Freeman K, Heggie H, Davis JS, Marshall CS, Davies J, 'Viral hepatitis in correctional facilities in the Northern Territory of Australia 2003-2017', BMC INFECTIOUS DISEASES, 21 (2021) [C1]
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Nova |
2021 |
Axfors C, Janiaud P, Schmitt AM, van't Hooft J, Smith ER, Haber NA, et al., 'Association between convalescent plasma treatment and mortality in COVID-19: a collaborative systematic review and meta-analysis of randomized clinical trials', BMC Infectious Diseases, 21 (2021)
Background: Convalescent plasma has been widely used to treat COVID-19 and is under investigation in numerous randomized clinical trials, but results are publicly available only f... [more]
Background: Convalescent plasma has been widely used to treat COVID-19 and is under investigation in numerous randomized clinical trials, but results are publicly available only for a small number of trials. The objective of this study was to assess the benefits of convalescent plasma treatment compared to placebo or no treatment and all-cause mortality in patients with COVID-19, using data from all available randomized clinical trials, including unpublished and ongoing trials (Open Science Framework, https://doi.org/10.17605/OSF.IO/GEHFX). Methods: In this collaborative systematic review and meta-analysis, clinical trial registries (ClinicalTrials.gov, WHO International Clinical Trials Registry Platform), the Cochrane COVID-19 register, the LOVE database, and PubMed were searched until April 8, 2021. Investigators of trials registered by March 1, 2021, without published results were contacted via email. Eligible were ongoing, discontinued and completed randomized clinical trials that compared convalescent plasma with placebo or no treatment in COVID-19 patients, regardless of setting or treatment schedule. Aggregated mortality data were extracted from publications or provided by investigators of unpublished trials and combined using the Hartung¿Knapp¿Sidik¿Jonkman random effects model. We investigated the contribution of unpublished trials to the overall evidence. Results: A total of 16,477 patients were included in 33 trials (20 unpublished with 3190 patients, 13 published with 13,287 patients). 32 trials enrolled only hospitalized patients (including 3 with only intensive care unit patients). Risk of bias was low for 29/33 trials. Of 8495 patients who received convalescent plasma, 1997 died (23%), and of 7982 control patients, 1952 died (24%). The combined risk ratio for all-cause mortality was 0.97 (95% confidence interval: 0.92; 1.02) with between-study heterogeneity not beyond chance (I2 = 0%). The RECOVERY trial had 69.8% and the unpublished evidence 25.3% of the weight in the meta-analysis. Conclusions: Convalescent plasma treatment of patients with COVID-19 did not reduce all-cause mortality. These results provide strong evidence that convalescent plasma treatment for patients with COVID-19 should not be used outside of randomized trials. Evidence synthesis from collaborations among trial investigators can inform both evidence generation and evidence application in patient care.
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2021 |
Stewart AG, Paterson DL, Young B, Lye DC, Davis JS, Schneider K, et al., 'Meropenem Versus Piperacillin-Tazobactam for Definitive Treatment of Bloodstream Infections Caused by AmpC ß-Lactamase-Producing Enterobacter spp, Citrobacter freundii, Morganella morganii, Providencia spp, or Serratia marcescens: A Pilot Multicenter Randomized Controlled Trial (MERINO-2)', Open Forum Infectious Diseases, 8 (2021) [C1]
Background: Carbapenems are recommended treatment for serious infections caused by AmpC-producing gram-negative bacteria but can select for carbapenem resistance. Piperacillin-taz... [more]
Background: Carbapenems are recommended treatment for serious infections caused by AmpC-producing gram-negative bacteria but can select for carbapenem resistance. Piperacillin-tazobactam may be a suitable alternative. Methods: We enrolled adult patients with bloodstream infection due to chromosomal AmpC producers in a multicenter randomized controlled trial. Patients were assigned 1:1 to receive piperacillin-tazobactam 4.5 g every 6 hours or meropenem 1 g every 8 hours. The primary efficacy outcome was a composite of death, clinical failure, microbiological failure, and microbiological relapse at 30 days. Results: Seventy-two patients underwent randomization and were included in the primary analysis population. Eleven of 38 patients (29%) randomized to piperacillin-tazobactam met the primary outcome compared with 7 of 34 patients (21%) in the meropenem group (risk difference, 8% [95% confidence interval {CI},-12% to 28%]). Effects were consistent in an analysis of the per-protocol population. Within the subcomponents of the primary outcome, 5 of 38 (13%) experienced microbiological failure in the piperacillin-tazobactam group compared to 0 of 34 patients (0%) in the meropenem group (risk difference, 13% [95% CI, 2% to 24%]). In contrast, 0% vs 9% of microbiological relapses were seen in the piperacillin-tazobactam and meropenem arms, respectively. Susceptibility to piperacillin-tazobactam and meropenem using broth microdilution was found in 96.5% and 100% of isolates, respectively. The most common AmpC ß-lactamase genes identified were blaCMY-2, blaDHA-17, blaCMH-3, and blaACT-17. No ESBL, OXA, or other carbapenemase genes were identified. Conclusions: Among patients with bloodstream infection due to AmpC producers, piperacillin-tazobactam may lead to more microbiological failures, although fewer microbiological relapses were seen. Clinical Trials Registration: NCT02437045.
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2021 |
Bowen AC, Tong SYC, Davis JS, 'Australia needs a prioritised national research strategy for clinical trials in a pandemic: lessons learned from COVID-19', MEDICAL JOURNAL OF AUSTRALIA, 215 56-+ (2021)
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2021 |
Howell J, Ward JS, Davies J, Clark PJ, Davis JS, 'Hepatocellular carcinoma in Indigenous Australians: a call to action', MEDICAL JOURNAL OF AUSTRALIA, 214 201-+ (2021)
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2021 |
Billot L, Cuthbertson B, Gordon A, Al-Beidh F, Correa M, Davis J, et al., 'Protocol summary and statistical analysis plan for the Selective Decontamination of the Digestive Tract in Intensive Care Unit Patients (SuDDICU) crossover, cluster randomized controlled trial', Critical Care and Resuscitation, 23 183-193 (2021)
Background: It is unclear whether the use of selective decontamination of the digestive tract (SDD) improves outcomes in ventilated patients in intensive care units (ICUs) and whe... [more]
Background: It is unclear whether the use of selective decontamination of the digestive tract (SDD) improves outcomes in ventilated patients in intensive care units (ICUs) and whether SDD is associated with the development of antibiotic resistance. Objective: To describe the study protocol and statistical analysis plan for the Selective Decontamination of the Digestive Tract in Intensive Care Unit Patients (SuDDICU) trial. Design, setting, participants and intervention: SuDDICU is an international, crossover, cluster randomised controlled trial of mechanically ventilated patients in ICUs using two 12-month trial periods. For each period, participating ICUs will implement SDD plus standard care or standard care alone. The SuDDICU drug intervention is an oral paste and gastric suspension of three antibiotics combined with a 4-day course of intravenous antibiotics. Observational ecological assessments will be conducted during five surveillance periods. The trial will be conducted in 19 ICUs in Australia and ten ICUs in Canada and the United Kingdom, and will recruit 15 000¿17 000 patients. Recruitment commenced in Australia in 2017. Main outcome measures: The primary outcome is all-cause hospital mortality. Secondary outcomes include: Duration of ventilation, ICU stay and hospital stay; incidence of new antibiotic-resistant organisms during the index ICU admission; changes in antibiotic-resistant organism rates; incidence of new Clostridioides difficile infections; and total use of antibiotics. Results and conclusions: SuDDICU will determine whether the use of SDD plus standard care is associated with a reduction in hospital mortality in ventilated ICU patients compared with standard care alone. It will also quantify the impact of the use of SDD on the development of antibiotic resistance. Trial registration: Australian New Zealand Clinical Trials Registry (ACTRN12615000411549) and ClinicalTrials.gov (NCT02389036).established through critical care clinical trial networks in Australia, New Zealand, Canada and the United Kingdom in 2009. The aim of this international collaboration is to design and conduct an integrated research program to address this fundamental knowledge and implementation gap that has concerned intensive care clinicians for more than 40 years. The program commenced with the publication of systematic reviews about the effects of SDD on mortality and antibiotic resistance,16,17 descriptive studies of barriers to global implementation of SDD,18,19 and feasibility studies.20 These initiatives informed the design of a large scale RCT aimed at determining whether SDD improves patient-centred outcomes without the development of antibiotic resistance. In this article, we describe the study protocol and statistical analysis plan for the Selective Decontamination of the Digestive Tract in Intensive Care Unit Patients (SuDDICU) crossover, cluster RCT.
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2021 |
Naqvi SSB, Davis J, Pickles RW, Loewenthal MR, 'Concerns and psychological well-being of healthcare workers during the COVID-19 pandemic in a tertiary care hospital in New South Wales.', Intern Med J, 51 1407-1413 (2021) [C1]
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Nova |
2021 |
Olijve L, Amarasena L, Best E, Blyth C, van den Boom M, Bowen A, et al., 'The role of Kingella kingae in pre-school aged children with bone and joint infections', Journal of Infection, 83 321-331 (2021) [C1]
Objectives: The Pre-school Osteoarticular Infection (POI) study aimed to describe the burden of disease, epidemiology, microbiology and treatment of acute osteoarticular infection... [more]
Objectives: The Pre-school Osteoarticular Infection (POI) study aimed to describe the burden of disease, epidemiology, microbiology and treatment of acute osteoarticular infections (OAI) and the role of Kingella kingae in these infections. Methods: Information about children 3¿60 months of age who were hospitalized with an OAI to 11 different hospitals across Australia and New Zealand between January 2012 and December 2016 was collected retrospectively. Results: A total of 907 cases (73%) were included. Blood cultures grew a likely pathogen in only 18% (140/781). The peak age of presentation was 12 to 24 months (466/907, 51%) and Kingella kingae was the most frequently detected microorganism in this age group (60/466, 13%). In the majority of cases, no microorganism was detected (517/907, 57%). Addition of PCR to culture increased detection rates of K. kingae. However, PCR was performed infrequently (63/907, 7%). Conclusions: This large multi-national study highlights the need for more widespread use of molecular diagnostic techniques for accurate microbiological diagnosis of OAI in pre-school aged children. The data from this study supports the hypothesis that a substantial proportion of pre-school aged children with OAI and no organism identified may in fact have undiagnosed K. kingae infection. Improved detection of Kingella cases is likely to reduce the average length of antimicrobial treatment.
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2021 |
Davey A, Tapley A, Mulquiney KJ, van Driel M, Fielding A, Holliday E, et al., 'Immediate and delayed antibiotic prescribing strategies used by Australian early-career GPs: a cross-sectional analysis', BRITISH JOURNAL OF GENERAL PRACTICE, 71 E895-E903 (2021) [C1]
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Nova |
2021 |
Atrey A, Khoshbin A, Rolfson O, Campbell D, Wood G, Bohm E, et al., 'Infection: The Final Frontier of Arthroplasty Management A Proposal for a Global Periprosthetic Joint Infection Registry from a Multinational Collaborative Group, the GAIA (Global Arthroplasty Infection Association)', JOURNAL OF BONE AND JOINT SURGERY-AMERICAN VOLUME, 103 (2021)
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2021 |
Billot L, Lipman J, Brett SJ, De Waele JJ, Cotta MO, Davis JS, et al., 'Statistical analysis plan for the BLING III study: a phase 3 multicentre randomised controlled trial of continuous versus intermittent ß-lactam antibiotic infusion in critically ill patients with sepsis', CRITICAL CARE AND RESUSCITATION, 23 273-284 (2021) [C1]
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2021 |
McNamara JF, Davis JS, 'Measuring the Meaningful', CLINICAL INFECTIOUS DISEASES, 73 248-249 (2021)
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2021 |
Scheetz MH, Pais GM, Lodise TP, Tong SYC, Davis JS, O'Donnell JN, et al., 'Of Rats and Men: a Translational Model To Understand Vancomycin Pharmacokinetic/Toxicodynamic Relationships', ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 65 (2021) [C1]
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2020 |
Johns BP, Loewenthal MR, Davis JS, Dewar DC, 'Open Debridement is Superior to Arthroscopic Debridement for the Infected Total Knee Arthroplasty', Journal of Arthroplasty, 35 3716-3723 (2020) [C1]
Background: Acutely infected total knee arthroplasty (TKA) is commonly treated with debridement, antibiotics, and implant retention (DAIR). There are no direct comparative studies... [more]
Background: Acutely infected total knee arthroplasty (TKA) is commonly treated with debridement, antibiotics, and implant retention (DAIR). There are no direct comparative studies to determine whether debridement should be performed open or arthroscopically for infected TKA. The aim of this study is to compare the outcomes of open vs arthroscopic debridement of infected TKAs. Methods: All patients at a university teaching hospital with an infected TKA treated with DAIR between 2002 and 2017 were analyzed. The primary outcome was successful treatment defined using international consensus criteria. Secondary outcomes included antibiotic suppression, prosthesis retention, mortality, postoperative range of motion, and length of stay. Clinical, laboratory, surgical, and antibiotic treatment data were collected. Propensity score matching was performed to control for selection bias. Results: DAIR was used in 141 patients. The initial DAIR procedure was open for 96 patients and arthroscopic for 45 patients. The success rate was 29% greater for open DAIR (45% open vs 16% arthroscopic; P < .001). After propensity score matching, this benefit was estimated to be 36% (95% confidence interval, 22%-50%; P < .0001). When those on antibiotic suppression were also considered successfully treated, open DAIR was still superior by 34% (95% confidence interval, 18%-51%; P < .0001). Conclusion: For infected TKA, open DAIR is a more successful index procedure compared with arthroscopic DAIR. Open DAIR remained more successful even when antibiotic suppression is considered successful treatment.
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Nova |
2020 |
Holland TL, Davis JS, 'Combination Therapy for MRSA Bacteremia: To beta or Not to beta?', CLINICAL INFECTIOUS DISEASES, 71 11-13 (2020)
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2020 |
Davis JS, Chu G, Pathinayake P, Jones D, Giffard P, Macera L, et al., 'Seroprevalence of Torque Teno Virus in hemodialysis and renal transplant patients in Australia: A cross-sectional study', TRANSPLANT INFECTIOUS DISEASE, 22 (2020) [C1]
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Nova |
2020 |
Davis JS, Ferreira D, Denholm JT, Tong SYC, 'Clinical trials for the prevention and treatment of COVID-19: current state of play', Medical Journal of Australia, 213 86-93 (2020) [C1]
Since coronavirus disease 2019 (COVID-19) emerged in Wuhan, China in December 2019 and spread around the world, over 1100 clinical studies have been registered globally on clinica... [more]
Since coronavirus disease 2019 (COVID-19) emerged in Wuhan, China in December 2019 and spread around the world, over 1100 clinical studies have been registered globally on clinical trials registries, including over 500 randomised controlled trials. Such rapid development and launch of clinical trials is impressive but presents challenges, including the potential for duplication and competition. There is currently no known effective treatment for COVID-19. In order to focus on those studies most likely to influence clinical practice, we summarise the 31 currently registered randomised trials with a target sample size of at least 1000 participants. We have grouped these trials into four categories: prophylaxis; treatment of outpatients with mild COVID-19; treatment of hospitalised patients with moderate COVID-19; and treatment of hospitalised patients with moderate or severe disease. The most common therapeutic agent being trialled currently is hydroxychloroquine (24 trials with potential sample size of over 25¿000 participants), followed by lopinavir¿ritonavir (seven trials) and remdesevir (five trials) There are many candidate drugs in pre-clinical and early phase development, and these form a pipeline for future large clinical trials if current candidate therapies prove ineffective or unsafe.
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2020 |
Tong SYC, Lye DC, Yahav D, Sud A, Robinson JO, Nelson J, et al., 'Effect of Vancomycin or Daptomycin with vs Without an Antistaphylococcal ß-Lactam on Mortality, Bacteremia, Relapse, or Treatment Failure in Patients with MRSA Bacteremia: A Randomized Clinical Trial', JAMA - Journal of the American Medical Association, 323 527-537 (2020) [C1]
Importance: Methicillin-resistant Staphylococcus aureus (MRSA) bacteremia is associated with mortality of more than 20%. Combining standard therapy with a ß-lactam antibiotic has ... [more]
Importance: Methicillin-resistant Staphylococcus aureus (MRSA) bacteremia is associated with mortality of more than 20%. Combining standard therapy with a ß-lactam antibiotic has been associated with reduced mortality, although adequately powered randomized clinical trials of this intervention have not been conducted. Objective: To determine whether combining an antistaphylococcal ß-lactam with standard therapy is more effective than standard therapy alone in patients with MRSA bacteremia. Design, Setting, and Participants: Open-label, randomized clinical trial conducted at 27 hospital sites in 4 countries from August 2015 to July 2018 among 352 hospitalized adults with MRSA bacteremia. Follow-up was complete on October 23, 2018. Interventions: Participants were randomized to standard therapy (intravenous vancomycin or daptomycin) plus an antistaphylococcal ß-lactam (intravenous flucloxacillin, cloxacillin, or cefazolin) (n = 174) or standard therapy alone (n = 178). Total duration of therapy was determined by treating clinicians and the ß-lactam was administered for 7 days. Main Outcomes and Measures: The primary end point was a 90-day composite of mortality, persistent bacteremia at day 5, microbiological relapse, and microbiological treatment failure. Secondary outcomes included mortality at days 14, 42, and 90; persistent bacteremia at days 2 and 5; acute kidney injury (AKI); microbiological relapse; microbiological treatment failure; and duration of intravenous antibiotics. Results: The data and safety monitoring board recommended early termination of the study prior to enrollment of 440 patients because of safety. Among 352 patients randomized (mean age, 62.2 [SD, 17.7] years; 121 women [34.4%]), 345 (98%) completed the trial. The primary end point was met by 59 (35%) with combination therapy and 68 (39%) with standard therapy (absolute difference, -4.2%; 95% CI, -14.3% to 6.0%). Seven of 9 prespecified secondary end points showed no significant difference. For the combination therapy vs standard therapy groups, all-cause 90-day mortality occurred in 35 (21%) vs 28 (16%) (difference, 4.5%; 95% CI, -3.7% to 12.7%); persistent bacteremia at day 5 was observed in 19 of 166 (11%) vs 35 of 172 (20%) (difference, -8.9%; 95% CI, -16.6% to -1.2%); and, excluding patients receiving dialysis at baseline, AKI occurred in 34 of 145 (23%) vs 9 of 145 (6%) (difference, 17.2%; 95% CI, 9.3%-25.2%). Conclusions and Relevance: Among patients with MRSA bacteremia, addition of an antistaphylococcal ß-lactam to standard antibiotic therapy with vancomycin or daptomycin did not result in significant improvement in the primary composite end point of mortality, persistent bacteremia, relapse, or treatment failure. Early trial termination for safety concerns and the possibility that the study was underpowered to detect clinically important differences in favor of the intervention should be considered when interpreting the findings. Trial Registration: ClinicalTrials.gov Identifier: NCT02365493.
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2020 |
Foley DA, Chew R, Raby E, Tong SYC, Davis JS, 'COVID-19 in the pre-pandemic period: a survey of the time commitment and perceptions of infectious diseases physicians in Australia and New Zealand', Internal Medicine Journal, 50 924-930 (2020) [C1]
Background: Infectious diseases (ID) physicians perform a pivotal role in directing the response to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Aim: To assess th... [more]
Background: Infectious diseases (ID) physicians perform a pivotal role in directing the response to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Aim: To assess the impact of SARS-CoV-2 on workload and the perceptions of ID physicians regarding the national response in Australia and New Zealand in the pre-pandemic. Methods: A survey of ID physicians in Australia and New Zealand was undertaken from 3 to 10 March 2020. Respondents were asked to estimate time spent on SARS-CoV-2-related activities in February and report their agreement with statements on a 5-point Likert scale ranging from 'strongly agree' to 'strongly disagree'. We also asked about the intended use of investigational agents. Results: There were 214 respondents (36% of 600 eligible participants). The median workload due to SARS-CoV-2-related activities was 34% of one full-time equivalent (interquartile range 18¿68%). Less than a quarter (50, 23%) of respondents had experience managing cases, while 33% (70) had experience preparing during similar pandemics. Nevertheless, 88% (188/213) believed they were well informed when giving testing and management advice, and 45% (95/212) believed their national response was well coordinated. Additionally, 41% (88/214) were worried about becoming infected through occupational exposure. Over half (116, 54%) the respondents intended to use lopinavir/ritonavir in confirmed cases of COVID-19 with severe disease. Conclusions: ID physicians spent a large proportion of time on SARS-CoV-2-related activities. Increased staffing is required to avoid burnout. Importantly, ID physicians feel well informed when giving advice. A national body should be established to co-ordinate response. Treatment efficacy trials are needed to clarify the utility of unproven treatments.
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2020 |
Hughes CM, Lennon D, Davis JS, 'CRyptOcoccosis in Newcastle and the hUnTer (CRONUT) An epidemiological study', Infection, Disease and Health, 25 34-42 (2020) [C1]
Background: Cryptococcus neoformans and Cryptococcus gattii are yeasts responsible for invasive infection, primarily pulmonary and neurological. Their clinical epidemiology has be... [more]
Background: Cryptococcus neoformans and Cryptococcus gattii are yeasts responsible for invasive infection, primarily pulmonary and neurological. Their clinical epidemiology has been previously described in an Australian national study, but this included no data from the Hunter region, where we anecdotally noted a high incidence of infection. We aimed to describe the epidemiology, management and outcomes of cryptococcal disease in the Hunter region and to compare this with previous Australian data. Methods: We searched our laboratory database for positive cryptococcal antigen and culture results from January 2003¿December 2016. We extracted demographic factors, risk factors, clinical presentation, treatment and outcomes from medical records. We used the 2010 census-derived estimated resident population to calculate population-based incidences. Results: Over a 13-year period, 107 patients had either a positive culture or a positive cryptococcal antigen with a compatible clinical syndrome. Of these, 46 (42.2%) were C. neoformans, 28 (25.7%) C. gattii, and 33 (30.3%) antigen only. The crude incidence (per million with 95% CI) for all disease was 9.5, and for culture proven disease was 2.5 for C. gattii and 4.1 for C. neoformans. Geospatial mapping by species revealed no evident cluster. Of the 63 patients where detailed information was available, around half were immunocompromised (3 [15%] for C. gattii and 25 [81%] for C. neoformans, p < 0.001). Complications were common, including visual loss (11 cases, 17.7%) and hearing loss (5 cases, 8%). Adverse outcomes at one year (death or neurological sequelae) occurred in 42%, and was significantly more likely (OR = 5.2, 95% CI 1.4¿18.8) in those with raised intracranial pressure at baseline. Adverse outcomes were no more common in those treated with lower doses of liposomal amphotericin (=150 mg/day, 5/10) than those treated with the recommended dose of 3¿5 mg/kg (=150 mg; 13/27). Conclusion: Although a rare disease, cryptococcosis is more common in the Hunter region than in other parts of Australia, and long-term sequelae are serious and common.
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Nova |
2020 |
Manning L, Davis JS, Robinson O, Clark B, Lorimer M, de Steiger R, Graves SE, 'High prevalence of older Australians with one or more joint replacements: estimating the population at risk for late complications of arthroplasty', ANZ JOURNAL OF SURGERY, 90 846-850 (2020) [C1]
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2020 |
Hosking K, Stewart G, Mobsby M, Skov S, Zhao Y, Su JY, et al., 'Data linkage and computerised algorithmic coding to enhance individual clinical care for Aboriginal people living with chronic hepatitis B in the Northern Territory of Australia - Is it feasible?', PLoS ONE, 15 (2020) [C1]
Background Chronic hepatitis B (CHB) is endemic in the Aboriginal population of Australia's Northern Territory (NT). However, many people's hepatitis B virus (HBV) statu... [more]
Background Chronic hepatitis B (CHB) is endemic in the Aboriginal population of Australia's Northern Territory (NT). However, many people's hepatitis B virus (HBV) status remains unknown. Objective 1. To maximise the utility of existing HBV test and vaccination data in the NT by creating a linked dataset and computerised algorithmic coding. 2. To undertake rigorous quality assurance processes to establish feasibility of using the linked dataset and computerised algorithmic coding for individual care for people living with CHB. Methods Step 1: We used deterministic data linkage to merge information from three separate patient databases. HBV testing and vaccination data from 2008-2016 was linked and extracted for 19,314 people from 21 remote Aboriginal communities in the Top End of the NT. Step 2: A computerised algorithm was developed to allocate one of ten HBV codes to each individual. Step 3: A quality assurance process was undertaken by a clinician, using standardised processes, manually reviewing all three databases, for a subset of 5,293 Aboriginal people from five communities to check the accuracy of each allocated code. Results The process of data linking individuals was highly accurate at 99.9%. The quality assurance process detected an overall error rate of 17.7% on the HBV code generated by the computerised algorithm. Errors occurred in source documentation, primarily from the historical upload of paper-based records to electronic health records. An overall HBV prevalence of 2.6% in five communities was found, which included ten cases of CHB who were previously unaware of infection and not engaged in care. Conclusions Data linkage of individuals was highly accurate. Data quality issues and poor sensitivity in the codes produced by the computerised algorithm were uncovered in the quality assurance process. By systematically, manually reviewing all available data we were able to allocate a HBV status to 91% of the study population.
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2020 |
Dallas A, Davey A, Mulquiney K, Davis J, Glasziou P, Van Driel M, Magin P, 'Delayed prescribing of antibiotics for acute respiratory infections by GP registrars: a qualitative study', Family practice, 37 406-411 (2020) [C1]
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Nova |
2020 |
Manning L, Metcalf S, Clark B, Robinson JO, Huggan P, Luey C, et al., 'Clinical Characteristics, Etiology, and Initial Management Strategy of Newly Diagnosed Periprosthetic Joint Infection: A Multicenter, Prospective Observational Cohort Study of 783 Patients', OPEN FORUM INFECTIOUS DISEASES, 7 (2020) [C1]
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2020 |
Davis JS, Young M, Marshall C, Tate-Baker J, Madison M, Sharma S, et al., 'Minimal Compared With Standard Monitoring During Sofosbuvir-Based Hepatitis C Treatment: A Randomized Controlled Trial.', Open Forum Infect Dis, 7 ofaa022 (2020) [C1]
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2020 |
Sullivan RP, Davies J, Binks P, Dhurrkay RG, Gurruwiwi GG, Bukulatjpi SM, et al., 'Point of care and oral fluid hepatitis B testing in remote Indigenous communities of northern Australia', JOURNAL OF VIRAL HEPATITIS, 27 407-414 (2020) [C1]
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2020 |
Eisenberg R, Hoffman G, Davis JS, Roberts N, Fallins K, Henri M, '"Trach in a Vac": Negative Pressure Tracheostomy Technique in the COVID-19 Pandemic', Annals of Otolaryngol and Rhinology, 7 1240-1244 (2020) |
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2020 |
Liu J, Tong SYC, Davis JS, Rhodes NJ, Scheetz MH, 'Vancomycin Exposure and Acute Kidney Injury Outcome: A Snapshot From the CAMERA2 Study', OPEN FORUM INFECTIOUS DISEASES, 7 (2020) [C1]
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2020 |
Milliken EJT, Davis JS, 'Pro: Bronchoscopy is essential for pulmonary infections in patients with haematological malignancies', BREATHE, 16 (2020)
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2020 |
Davis JS, Ferreira D, Paige E, Gedye C, Boyle M, 'Infectious complications of biological and small molecule targeted immunomodulatory therapies', Clinical Microbiology Reviews, 33 1-117 (2020) [C1]
The past 2 decades have seen a revolution in our approach to therapeutic immunosuppression. We have moved from relying on broadly active traditional medications, such as prednisol... [more]
The past 2 decades have seen a revolution in our approach to therapeutic immunosuppression. We have moved from relying on broadly active traditional medications, such as prednisolone or methotrexate, toward more specific agents that often target a single receptor, cytokine, or cell type, using monoclonal antibodies, fusion proteins, or targeted small molecules. This change has transformed the treatment of many conditions, including rheumatoid arthritis, cancers, asthma, and inflammatory bowel disease, but along with the benefits have come risks. Contrary to the hope that these more specific agents would have minimal and predictable infectious sequelae, infectious complications have emerged as a major stumbling block for many of these agents. Furthermore, the growing number and complexity of available biologic agents makes it difficult for clinicians to maintain current knowledge, and most review articles focus on a particular target disease or class of agent. In this article, we review the current state of knowledge about infectious complications of biologic and small molecule immunomodulatory agents, aiming to create a single resource relevant to a broad range of clinicians and researchers. For each of 19 classes of agent, we discuss the mechanism of action, the risk and types of infectious complications, and recommendations for prevention of infection.
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Nova |
2020 |
Dotel R, O'Sullivan MVN, Gilroy N, Sivagnanam S, Davis JS, 'SARS-CoV-2 endgame: attitudes and predictions of Australian and New Zealand infectious diseases and microbiology specialists', INTERNAL MEDICINE JOURNAL, 50 1437-1438 (2020)
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2020 |
Saeed K, Esposito S, Akram A, Ascione T, Bal AM, Bassetti M, et al., 'Hot topics in diabetic foot infection', INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, 55 (2020) [C1]
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Nova |
2020 |
Denholm JT, Davis J, Paterson D, Roberts J, Morpeth S, Snelling T, et al., 'The Australasian COVID-19 Trial (ASCOT) to assess clinical outcomes in hospitalised patients with SARS-CoV-2 infection (COVID-19) treated with lopinavir/ritonavir and/or hydroxychloroquine compared to standard of care: A structured summary of a study protocol for a randomised controlled trial', TRIALS, 21 (2020)
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2020 |
Browning S, Walker HN, Ryan T, Pickles R, Loftus M, Trubiano JA, et al., 'Treatment of Neisseria meningitidis prosthetic joint infections with short-course antibiotics: Three cases and a literature review', Journal of Bone and Joint Infection, 6 33-37 (2020)
Neisseria meningitidis is a rare cause of prosthetic joint infection (PJI), with only three cases previously reported. Here we report three further cases, all of which were succes... [more]
Neisseria meningitidis is a rare cause of prosthetic joint infection (PJI), with only three cases previously reported. Here we report three further cases, all of which were successfully treated with implant retention and short-course antibiotics (<6 weeks). Copyright:
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2020 |
Gorges H, Heal C, van Driel M, Tapley A, Davis J, Davey A, et al., 'Prevalence and Associations of General Practice Registrars' Management of Impetigo: A Cross-Sectional Analysis From the Registrar Clinical Encounters in Training (ReCEnT) Study', DERMATOLOGY PRACTICAL & CONCEPTUAL, 10 (2020) [C1]
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Nova |
2020 |
Foley DA, Kirk M, Jepp C, Brophy-Williams S, Tong SYC, Davis JS, et al., 'COVID-19 and paediatric health services: A survey of paediatric physicians in Australia and New Zealand', JOURNAL OF PAEDIATRICS AND CHILD HEALTH, 56 1219-1224 (2020) [C1]
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2019 |
Davis JS, Magin PJ, van Driel ML, 'The false dichotomy of viral versus bacterial aetiology in upper respiratory tract infections', MEDICAL JOURNAL OF AUSTRALIA, 211 108-+ (2019)
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2019 |
Campbell AJ, Dotel R, Blyth CC, Davis JS, Tong SYC, Bowen AC, 'Adjunctive protein synthesis inhibitor antibiotics for toxin suppression in Staphylococcus aureus infections: A systematic appraisal', Journal of Antimicrobial Chemotherapy, 74 1-5 (2019) [C1]
Staphylococcus aureus is a Gram-positive bacteriumthat is among the most common pathogens in humans causing a broad spectrum of clinical manifestations.1 Its ability to express mu... [more]
Staphylococcus aureus is a Gram-positive bacteriumthat is among the most common pathogens in humans causing a broad spectrum of clinical manifestations.1 Its ability to express multiple extracellular toxins, including haemolysins, leukotoxins, exfoliative toxins, enterotoxins and toxic shock syndrome toxin-1 (TSST-1), which destroy host cells and circumvent host immune defence mechanisms, contribute to its success as a pathogen.2 Treatment of S. aureus infection routinely relies on cell-wall-active antibiotics, including b-lactams and glycopeptides, which do not attenuate toxin production. Indeed, in vitro and animal studies have demonstrated that b-lactams (at subinhibitory concentrations) can increase S. aureus toxin production3-5 and vancomycin has minimal effect (Figure 1).3,4 The principal protein synthesis inhibitor (PSI) antibiotics that are active against S. aureus and reduce bacterial toxin production are clindamycin and linezolid. Other PSI antibiotics with antistaphylococcal activity include macrolides, chloramphenicol, fusidic acid and streptogramins (quinupristin/dalfopristin, pristinamycin), which all bind to the 50S ribosomal subunit, interfering with its functions of controlling guanosine triphosphate hydrolysis, the formation of peptide bonds and channelling the peptide through the subunit tunnel. Tetracyclines, tigecycline and aminoglycosides are PSI antibiotics that all bind to the 30S subunit and interfere with the principal function of decoding mRNA to peptides (Figure 1).3,6 Whilst the antibiotic mechanism of action has been established, evidence is conflicting regarding the mechanism of action (transcription, translation or both) PSIs have on toxin production.3,7 The resulting impact that antibiotic resistance has on S. aureus toxin production in laboratory in vitro studies is also inconsistent.8,9 The addition of a PSI antibiotic to standard therapy (cell-wallactive antibiotic) may be used in the treatment of S. aureus infections to: broaden coverage during empirical therapy; achieve synergy; enhance tissue biofilm penetration; or limit toxin production.10 This review summarizes the current, available evidence on combination antibiotic therapy for suppression of toxin synthesis in the treatment of S. aureus infections, with a focus on the PSI antistaphylococcal antibiotics for which there is the most evidence, namely clindamycin, linezolid and gentamicin.
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2019 |
Yuen LKW, Littlejohn M, Duchêne S, Edwards R, Bukulatjpi S, Binks P, et al., 'Tracing Ancient Human Migrations into Sahul Using Hepatitis B Virus Genomes', Molecular Biology and Evolution, 36 942-954 (2019) [C1]
The entry point and timing of ancient human migration into continental Sahul (the combined landmass of Australia, New Guinea, and Tasmania) are subject to debate. Unique strains o... [more]
The entry point and timing of ancient human migration into continental Sahul (the combined landmass of Australia, New Guinea, and Tasmania) are subject to debate. Unique strains of hepatitis B virus (HBV) are endemic among modernday Australian Aboriginals (HBV/C4) and Indigenous Melanesians (HBV/C3). We postulated that HBV genomes could be used to infer human population movements because the main HBV transmission route in endemic populations is via mother-to-child for genotypes B and C infections. Phylogenetic and phylogeographic analyses of HBV genomes inferred the origin of HBV/C4 to be >59 thousand years ago (ka) (95% HPD: 34-85 ka), and most likely to have occurred on the Sunda Shelf (southeast extension of the continental shelf of Southeast Asia). Our analysis further suggested an age of >51 ka (95% Highest Posterior Density (HPD): 36-67 ka) for the most recent common ancestor of HBV/C4 in Australia, correlating with the arrival time of anatomically modern humans into Australia, with the entry point suggested along a southern route via Timor. While we also inferred the origin of HBC/C3 to be on the Sunda Shelf, our analyses suggested that it was carried into Melanesia by Indigenous Melanesians who migrated through New Guinea north of the highlands. These findings reveal that HBV genomes can be used to infer ancient human population movements.
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2019 |
Henderson A, Harris P, Hartel G, Paterson D, Turnidge J, Davis JS, Tong SYC, 'Benzylpenicillin versus flucloxacillin for penicillin-susceptible Staphylococcus aureus bloodstream infections from a large retrospective cohort study', International Journal of Antimicrobial Agents, 54 491-495 (2019) [C1]
In clinical practice, differing opinions exists regarding the optimal management of patients with penicillin-susceptible Staphylococcus aureus (PSSA) bloodstream infection (BSI). ... [more]
In clinical practice, differing opinions exists regarding the optimal management of patients with penicillin-susceptible Staphylococcus aureus (PSSA) bloodstream infection (BSI). The aim of this study was to compare the 30-day mortality of patients treated with benzylpenicillin or flucloxacillin for PSSA BSI from a large prospectively collected data set from Australia and New Zealand. A logistic regression model and propensity score treatment analysis using inverse probability of treatment weighting were used. A total of 915 patients were included in the study, with an overall mortality rate of 12.9% (118/915) [benzylpenicillin 10.5% (33/315) and flucloxacillin 14.2% (85/600)]. Endocarditis was associated with benzylpenicillin treatment choice, whereas skin and soft-tissue infection was associated with flucloxacillin treatment choice. In the multivariate analysis, increased 30-day mortality was associated with flucloxacillin compared with benzylpenicillin [odds ratio (OR) = 1.6, 95% confidence interval (CI) 1.0¿2.5; P = 0.05). When adjusted for treatment choice in the propensity score analysis, flucloxacillin was again associated with increased 30-day mortality (OR = 1.06, 95% CI 1.01¿1.1; P = 0.03). An increase in 30-day mortality associated with flucloxacillin use suggests a potential benefit for benzylpenicillin therapy in patients with PSSA BSI.
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2019 |
Dotel R, Tong SYC, Bowen A, Nelson JN, O'Sullivan MVN, Campbell AJ, et al., 'CASSETTEclindamycin adjunctive therapy for severe Staphylococcus aureus treatment evaluation: study protocol for a randomised controlled trial', TRIALS, 20 (2019)
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2019 |
Meumann EM, Anstey NM, Currie BJ, Piera KA, Baird R, Sarovich DS, Davis JS, 'Whole-genome sequencing to differentiate relapse from reinfection in community-onset bacteremic acinetobacter baumannii pneumonia', Open Forum Infectious Diseases, 6 1-4 (2019) [C1]
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Nova |
2019 |
Davies J, Smith EL, Littlejohn M, Edwards R, Sozzi V, Jackson K, et al., 'Towards Genotype-Specific Care for Chronic Hepatitis B: The First 6 Years Follow Up From the CHARM Cohort Study', OPEN FORUM INFECTIOUS DISEASES, 6 (2019) [C1]
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Nova |
2019 |
Lipman J, Brett SJ, De Waele JJ, Cotta MO, Davis JS, Finfer S, et al., 'A protocol for a phase 3 multicentre randomised controlled trial of continuous versus intermittent ß-lactam antibiotic infusion in critically ill patients with sepsis: BLING III', CRITICAL CARE AND RESUSCITATION, 21 63-68 (2019)
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2019 |
Dotel R, O'Sullivan MVN, Davis JS, Newton PJ, Gilbert GL, 'Molecular epidemiology of methicillin-resistant Staphylococcus aureus isolates in New South Wales, Australia, 2012 2017', Infection, Disease and Health, 24 134-140 (2019) [C1]
Background: To better understand the molecular epidemiology of MRSA and to assess the utility of 19-target binary typing we undertook large-scale epidemiological surveillance of M... [more]
Background: To better understand the molecular epidemiology of MRSA and to assess the utility of 19-target binary typing we undertook large-scale epidemiological surveillance of MRSA from invasive and non-invasive clinical specimens, and screening swabs. Methods: Binary typing was performed on clinical MRSA isolates collected in New South Wales (NSW), Australia between 01/01/2012 - 31/12/2017. Binary type (BT) predicted multilocus sequence type (ST) and spa types based on results from isolates which had been characterised by both methods. Results: 7624 MRSA isolates were analysed of which 3581 (47%) were wounds or skin & softtissue isolates (W/SSTI), 2436 (32%) screening swabs, 469 (6%) blood cultures (BC), 780 (10%) others, and 358 (5%) unknown. We identified 731 BTs, 54 spa types, and 31 STs. ST239 was the commonest MRSA clone in 2012 (30%), but it decreased to 7% in 2017 (p <0.001). In contrast, <0.5% of MRSA were ST45 in 2012 compared to 14% in 2017 (p<0.001). An emergence of PVL-positive ST22 was also noted. Of all isolates, 28% (2122/7624) were lukS/PVL positive; the proportion, among prospectively collected isolates increased from 24% (1406/5858) to 33% (1933/5858) between 2012 and 2017 (p <0.0001). 43% (1534/3581) W/SSTI, 20% (95/469) BC and 10% (239/2436) screening swabs were PVL-positive. Conclusions: A major change in the epidemiology of MRSA was noted with a decline of ST239, an emergence of ST45 and PVL-positive ST22, and a significant increase in PVL-positive isolates. Binary typing can be a useful routine laboratory test for prospective molecular surveillance of MRSA colonisation and infection.
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Nova |
2019 |
Tong SYC, Campbell A, Bowen AC, Davis JS, 'A Survey of Infectious Diseases and Microbiology Clinicians in Australia and New Zealand About the Management of
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2019 |
Davis JS, Jones CA, Cheng AC, Howden BP, 'Australia's response to the global threat of antimicrobial resistance: past, present and future', MEDICAL JOURNAL OF AUSTRALIA, 211 106-+ (2019)
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2019 |
Alwan M, Davis JS, Daneman N, Fowler R, Shehabi Y, Rogers B, 'Duration of therapy recommended for bacteraemic illness varies widely amongst clinicians', INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, 54 184-188 (2019) [C1]
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Nova |
2019 |
Doernberg SB, Tran TTT, Tong SYC, Paul M, Yahav D, Davis JS, et al., 'Good Studies Evaluate the Disease While Great Studies Evaluate the Patient: Development and Application of a Desirability of Outcome Ranking Endpoint for Staphylococcus aureus Bloodstream Infection.', Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 68 1691-1698 (2019) [C1]
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2019 |
Meumann EM, Anstey NM, Currie BJ, Piera KA, Kenyon JJ, Hall RM, et al., 'Genomic epidemiology of severe community-onset
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Nova |
2019 |
Heal C, Gorges H, Van Driel ML, Tapley A, Davis J, Davey A, et al., 'Antibiotic stewardship in skin infections: A cross-sectional analysis of early-career GP's management of impetigo', BMJ Open, 9 (2019) [C1]
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Nova |
2019 |
Campbell AJ, Tong SYC, Davis JS, Munro APS, Blyth CC, Bowen AC, 'Infectious Diseases Clinician's Variation in the Management of Pediatric
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2019 |
Weis S, Kesselmeier M, Davis JS, Morris AM, Lee S, Scherag A, et al., 'Cefazolin versus anti-staphylococcal penicillins for the treatment of patients with
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2018 |
Magin P, Tapley A, Morgan S, Davis JS, McElduff P, Yardley L, et al., 'Reducing early career general practitioners' antibiotic prescribing for respiratory tract infections: a pragmatic prospective non-randomised controlled trial.', Family practice, 35 53-60 (2018) [C1]
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Nova |
2018 |
Brereton CJ, Lennon D, Browning S, Dunn E, Ferguson JK, Davis JS, 'Is gentamicin safe and effective for severe community-acquired pneumonia? An 8-year retrospective cohort study', International Journal of Antimicrobial Agents, 51 862-866 (2018) [C1]
Gram-negative bacilli are the causative organisms in a significant proportion of patients with severe community-acquired pneumonia (CAP) admitted to the intensive care unit (ICU).... [more]
Gram-negative bacilli are the causative organisms in a significant proportion of patients with severe community-acquired pneumonia (CAP) admitted to the intensive care unit (ICU). Clinical guidelines recommend broad-spectrum antimicrobials for empirical treatment despite alarming global trends in antimicrobial resistance. In this study, we aimed to assess the safety and efficacy of gentamicin, an aminoglycoside with potent bactericidal activity, for empirical Gram-negative coverage of severe CAP in patients admitted to the ICU. A retrospective cohort study was performed at a university teaching hospital where the severe CAP guideline recommends penicillin, azithromycin and gentamicin as empirical cover. Ceftriaxone plus azithromycin is used as an alternative. Adults with radiologically-confirmed severe CAP were included, comparing those who received gentamicin in the first 72 h of admission with those who did not. Participants were identified using ICD-10 codes for bacterial pneumonia and data manually extracted from electronic medical records. Of 148 patients admitted with severe pneumonia, 117 were given at least one dose of gentamicin whereas the remaining 31 were not. The two groups were well matched in terms of demographics, co-morbidities and disease severity. There were no significant differences between the gentamicin and no-gentamicin groups in the incidence of acute kidney injury [60/117 (51%) vs. 16/31 (52%), respectively], hospital mortality [20/117 (17%) vs. 7/31 (23%)] and secondary outcomes including relapse and length of hospital stay. In conclusion, gentamicin is safe and has similar outcomes to alternative Gram-negative antimicrobial regimens for empirical coverage in severe CAP patients admitted to the ICU.
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Nova |
2018 |
Davies J, Boutlis CS, Marshall CS, Tong SYC, Davis JS, 'The unique aspects of chronic hepatitis B infection in Aboriginal and Torres Strait Islander people', INTERNAL MEDICINE JOURNAL, 48 484-485 (2018)
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2018 |
Cheah BC, Davies J, Singh GR, Wood N, Jackson K, Littlejohn M, et al., 'Sub-optimal protection against past hepatitis B virus infection where subtype mismatch exists between vaccine and circulating viral genotype in northern Australia', VACCINE, 36 3533-3540 (2018) [C1]
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2018 |
Lwin N, Boyle M, Davis JS, 'Adalimumab for Corticosteroid and Infliximab-Resistant Immune Reconstitution Inflammatory Syndrome in the Setting of TB/HIV Coinfection', OPEN FORUM INFECTIOUS DISEASES, 5 (2018)
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2018 |
Davis JS, Young M, Lennox S, Jones T, Piera K, Pickles R, Oakley S, 'The effect of curing hepatitis C with direct-acting antiviral treatment on endothelial function', Antiviral Therapy, 23 687-694 (2018) [C1]
Background: Epidemiological data suggest that chronic HCV infection (CHC) is associated with increased cardiovascular risk, but it is unknown if it is associated with endothelial ... [more]
Background: Epidemiological data suggest that chronic HCV infection (CHC) is associated with increased cardiovascular risk, but it is unknown if it is associated with endothelial dysfunction. We aimed to assess the effect of antiviral treatment on endothelial function in non-cirrhotic adults with CHC. Methods: Self-controlled before and after study. All patients had genotype-1 CHC and were treated with 12 weeks of paritaprevir/ritonavir, ombitasvir and dasabuvir (PrOD), with ribavirin added for those with genotype-1a infection. Endothelial function was assessed at three time points before antiviral treatment, at treatment weeks 1, 4, 8 and 12, and 12 weeks after the end of treatment. The main assessment tools were reactive hyperaemia peripheral arterial tonometry (RHPAT) and serum concentrations of angiopoietin-2 (Ang-2) and E-selectin. Results: A total of 16 patients were enrolled. Mean (SD) age was 51.4 (6.9) years and 11 participants (69%) were male. All 16 patients achieved a sustained virological response. The mean (SD) baseline RHPAT index was 2.05 (0.48), and there was no significant change during treatment (mean within-patient change from baseline to end of treatment =-0.23 [0.45]; P= not significant). There was a significant improvement in both mean Ang-2 (baseline 2.44 [0.79] ng/ml, within-patient change -0.60 [0.44]; P<0.001) and E-selectin (baseline 48.7 [21.5] ng/ml, within-patient change -14.4 [13.0]; P<0.001). Conclusions: Removing HCV viraemia is associated with a significant improvement in endothelial function as measured by serum markers, but not in bedside microvascular reactivity. Chronic HCV viraemia may be associated with endothelial cell dysfunction and therefore long-term cardiovascular risk.
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Nova |
2018 |
Chong BSW, Brereton CJ, Gordon A, Davis JS, 'Epidemiology, Microbiological Diagnosis, and Clinical Outcomes in Pyogenic Vertebral Osteomyelitis: A 10-year Retrospective Cohort Study.', Open forum infectious diseases, 5 1-6 (2018) [C1]
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Nova |
2018 |
Saeed K, Esposito S, Gould I, Ascione T, Bassetti M, Bonnet E, et al., 'Hot topics in necrotising skin and soft tissue infections', INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, 52 1-10 (2018)
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2018 |
Davis JS, Turnidge J, Tong SYC, 'A large retrospective cohort study of cefazolin compared with flucloxacillin for methicillin-susceptible Staphylococcus aureus bacteraemia', INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, 52 297-300 (2018) [C1]
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2017 |
Saeed K, Dryden M, Bassetti M, Bonnet E, Bouza E, Chan M, et al., 'Prosthetic joints: shining lights on challenging blind spots', INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, 49 153-161 (2017) [C1]
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2017 |
Harris PNA, McNamara JF, Lye DC, Davis JS, Bernard L, Cheng AC, et al., 'Proposed primary endpoints for use in clinical trials that compare treatment options for bloodstream infection in adults: a consensus definition', CLINICAL MICROBIOLOGY AND INFECTION, 23 533-541 (2017) [C1]
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2017 |
Chaves NJ, Paxton GA, Biggs B-A, Thambiran A, Gardiner J, Williams J, et al., 'The Australasian Society for Infectious Diseases and Refugee Health Network of Australia recommendations for health assessment for people from refugee-like backgrounds: an abridged outline', MEDICAL JOURNAL OF AUSTRALIA, 206 310-315 (2017)
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2017 |
Lora-Tamayo J, Senneville E, Ribera A, Bernard L, Dupon M, Zeller V, et al., 'The Not-So-Good Prognosis of Streptococcal Periprosthetic Joint Infection Managed by Implant Retention: The Results of a Large Multicenter Study', CLINICAL INFECTIOUS DISEASES, 64 1742-1752 (2017)
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2017 |
Davis JS, Barrett T, Harris L, 'Knowledge of proprietary and generic drug names among hospital prescribers: time to mandate generic prescribing?', Internal Medicine Journal, 47 959-962 (2017) [C1]
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Nova |
2017 |
Davies J, Li SQ, Tong SY, Baird RW, Beaman M, Higgins G, et al., 'Establishing contemporary trends in hepatitis B sero-epidemiology in an Indigenous population', PLOS ONE, 12 (2017)
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2017 |
Davis JS, Mackrow C, Binks P, Fletcher W, Dettwiller P, Marshall C, et al., 'A double-blind randomized controlled trial of ibuprofen compared to placebo for uncomplicated cellulitis of the upper or lower limb', Clinical Microbiology and Infection, 23 242-246 (2017) [C1]
Objectives Cellulitis is a common skin infection resulting in inflammation that may take weeks to resolve despite appropriate antibiotics. It is unclear whether the adjunctive use... [more]
Objectives Cellulitis is a common skin infection resulting in inflammation that may take weeks to resolve despite appropriate antibiotics. It is unclear whether the adjunctive use of nonsteroidal anti-inflammatory drugs hastens the resolution of inflammation in patients with cellulitis. Methods We conducted a double-blind, randomized controlled trial comparing ibuprofen 400¿mg three times daily for 5¿days with identical placebo in adults with uncomplicated cellulitis of the upper or lower limb who were treated with intravenous cefazolin via an outpatient parenteral antibiotic treatment service at one of two Australian hospitals. Participants were assessed twice daily by a study nurse. The primary outcome measure was the proportion of patients with regression of inflammation 48¿hours after the first effective dose of parenteral antibiotics (trial registration ANZCTR 12611000515998). Results Fifty-one patients were enrolled; 48 had sufficient data available to be included in the modified intention-to-treat analysis. Inflammation had begun to regress at 48¿hours in 20 participants (80%) in the ibuprofen group compared to 15 (65%) in the placebo group (absolute risk difference¿+15%; 95% confidence interval¿-10 to¿+40; p >0.05). There was no significant difference in any secondary outcome. Ibuprofen appeared safe, with no patients developing renal impairment or necrotizing fasciitis. Conclusions This trial demonstrated no significant benefit of adjunctive ibuprofen in adults with uncomplicated cellulitis. The trial was powered to detect a large effect, and hence it is unclear whether the 15% absolute increase in the primary end point in the ibuprofen group was attributable to chance.
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Nova |
2017 |
Dallas A, van Driel M, Morgan S, Tapley A, Henderson K, Oldmeadow C, et al., 'Antibiotic prescribing for acute otitis media and acute sinusitis: A cross-sectional analysis of the ReCEnT study exploring the habits of early career doctors in family practice', Family Practice, 34 180-187 (2017) [C1]
Background. Antibiotic resistance is a public health concern, and is linked to over-prescribing. In self-limiting infections such as acute otitis media (AOM) and acute sinusitis, ... [more]
Background. Antibiotic resistance is a public health concern, and is linked to over-prescribing. In self-limiting infections such as acute otitis media (AOM) and acute sinusitis, prescribing remains high despite strong guideline recommendations against the routine use of antibiotics. Early career General Practitioners may find evidence-based prescribing challenging. Aim. To establish the prevalence and associations of antibiotic prescribing for AOM and acute sinusitis by Australian vocational trainees in General Practice. Method. A cross-sectional analysis of data from the Registrar Clinical Encounters in Training (ReCEnT) study. This ongoing, multicentre prospective cohort study documents trainees' consultation-based clinical experiences. Univariate and logistic regression analyses were conducted on data recorded in consultations for AOM or acute sinusitis in nine collection periods during 2010-2014. Results. Data from 856 individual trainees (response rate 95.2%) were analysed. AOM was managed in 0.9% of encounters. Antibiotics were prescribed in 78.8% of cases. Prescribing was significantly associated with longer consultation time and first presentation for this problem. There was no significant association with patient age group. Acute sinusitis was managed in 0.9% of encounters. Antibiotics were prescribed in 71.2% of cases. Later-stage trainees and trainees who did not receive their primary medical qualification in Australia were more likely to prescribe an antibiotic for acute sinusitis. Conclusion. Early career GPs are not prescribing in an evidence-based manner. The complexity of guidelines for AOM and acute sinusitis may be confusing for prescribers, especially early career doctors struggling with inexperience and diagnostic uncertainty. Educational interventions are necessary to bring prescribing rates closer to quality benchmarks.
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Nova |
2017 |
Jones CA, Davis JS, Looke DFM, 'Death from an untreatable infection may signal the start of the post-antibiotic era', MEDICAL JOURNAL OF AUSTRALIA, 206 292-+ (2017)
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2017 |
Udy AA, Dulhunty JM, Roberts JA, Davis JS, Webb SAR, Bellomo R, et al., 'Association between augmented renal clearance and clinical outcomes in patients receiving ß-lactam antibiotic therapy by continuous or intermittent infusion: a nested cohort study of the BLING-II randomised, placebo-controlled, clinical trial', INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, 49 624-630 (2017)
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2017 |
Davis JS, Tapley A, Morgan S, van Driel ML, Magin PJ, 'Clinical experience of patients with hepatitis C virus infection among Australian GP trainees', MEDICAL JOURNAL OF AUSTRALIA, 206 309-309 (2017)
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2016 |
Dallas A, van Driel M, Morgan S, Tapley A, Henderson K, Ball J, et al., 'Antibiotic prescribing for sore throat: A cross-sectional analysis of the ReCEnT study exploring the habits of early-career doctors in family practice', Family Practice, 33 302-308 (2016) [C1]
Background: Acute sore throat is a common condition presenting to family practitioners. It is usually self-limiting, with antibiotic treatment recommended only for high-risk prese... [more]
Background: Acute sore throat is a common condition presenting to family practitioners. It is usually self-limiting, with antibiotic treatment recommended only for high-risk presentations. Overprescribing of antibiotics contributes to individual and community resistance. Learning to prescribe in the context of diagnostic uncertainty and patient pressures is a challenge for early-career doctors. Prescribing habits develop early and tend not to change with time. Objective: To establish the prevalence and associations of antibiotic prescribing for acute sore throat by Australian vocational trainees in family practice. Method: A cross-sectional analysis of data from the Registrar Clinical Encounters in Training (ReCEnT) study. This ongoing, multicentre prospective cohort study documents the nature of trainees' consultation-based clinical experiences. Univariate and logistic regression analyses were conducted on data recorded in consultations for sore throat in nine collection periods during 2010-14. Results: Data from 856 individual trainees (response rate 95.2%) were analysed. Sore throat was managed in 2.3% encounters. Antibiotics were prescribed for 71.5% of sore throat diagnoses. The variables associated with prescribing were inner-regional location and higher socio-economic area. There was no significant association with younger age of patient or greater trainee experience. If an antibiotic was prescribed, the trainee was more likely to seek information from guidelines or a supervisor. Conclusions: The high frequency of antibiotic prescribing and the lack of attenuation in prescribing with increased experience suggest current educational interventions and the apprenticeship model of training is not fostering appropriate practice in this important clinical area. Targeted educational interventions, for supervisors as well as trainees, are indicated.
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Nova |
2016 |
Tong SYC, Nelson J, Paterson DL, Fowler VG, Howden BP, Cheng AC, et al., 'CAMERA2-combination antibiotic therapy for methicillin-resistant
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Nova |
2016 |
Magin PJ, Morgan S, Tapley A, Henderson KM, Holliday EG, Ball J, et al., 'Changes in early-career family physicians' antibiotic prescribing for upper respiratory tract infection and acute bronchitis: A multicentre longitudinal study', Family Practice, 33 360-367 (2016) [C1]
Background. Inappropriate antibiotic prescription and subsequent antibacterial resistance are major threats to health worldwide. Objectives. We aimed to establish whether early-ca... [more]
Background. Inappropriate antibiotic prescription and subsequent antibacterial resistance are major threats to health worldwide. Objectives. We aimed to establish whether early-career 'apprenticeship-model' experience in family practice influences antibiotic prescribing for respiratory tract infections and to also establish other associations of antibiotic prescribing changes during this early-career experience. Methods. A longitudinal analysis (2010-2014) of a cohort study of Australian GP registrars' (vocational trainees') consultations. Registrars from five regional training programs recorded data from 60 consecutive consultations, once each 6-month training Term, including the diagnoses managed and medications prescribed. The outcomes were whether an antibiotic was prescribed for the diagnoses 'upper respiratory tract infection (URTI)' and 'acute bronchitis/bronchiolitis'. Generalized linear mixed modelling was used to account for repeated measures on registrars and to include the time component: 'Term'. Results. A total of 856 registrars recorded 108759 consultations, including 8715 'URTI' diagnoses (5.15% of diagnoses) and 2110 'acute bronchitis/bronchiolitis' diagnoses (1.25%). Antibiotics were prescribed in 16.3% [95% confidence interval (CI) 14.9-17.8] of URTI and 72.2% (95% CI 69.6-74.6) of acute bronchitis/bronchiolitis diagnoses. Moving from an earlier to later term did not significantly influence registrars' antibiotic prescribing for URTI [adjusted odds ratio (OR) 0.95; 95% CI 0.87, 1.04, P = 0.27] or acute bronchitis/bronchiolitis [OR 1.01 (95% CI 0.90-1.14), P = 0.86]. Significant associations of antibiotic prescribing for URTIs were the registrar being non-Australian educated, greater patient age, practices not privately billing patients, pathology being ordered, longer consultation duration and the registrar seeking in-consultation information or advice (including from their supervisor). Conclusions. Early-career experience/training failed to produce rational antibiotic prescribing for URTI and acute bronchitis/bronchiolitis. Our findings suggest that prescribing interventions could target the registrar-supervisor dyad.
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Nova |
2016 |
van Driel ML, Morgan S, Tapley A, McArthur L, McElduff P, Yardley L, et al., 'Changing the Antibiotic Prescribing of general practice registrars: the ChAP study protocol for a prospective controlled study of a multimodal educational intervention', BMC FAMILY PRACTICE, 17 (2016)
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2016 |
McGuinness SL, Whiting SE, Baird R, Currie BJ, Ralph AP, Anstey NM, et al., 'Nocardiosis in the tropical northern territory of Australia, 1997-2014', Open Forum Infectious Diseases, 3 1-25 (2016)
Background: Nocardia is an opportunistic pathogen that can cause life-threatening disease. We aimed to characterise the epidemiological, microbiological and clinical features of n... [more]
Background: Nocardia is an opportunistic pathogen that can cause life-threatening disease. We aimed to characterise the epidemiological, microbiological and clinical features of nocardiosis in the tropical north of Australia. Methods: We conducted a retrospective cohort study of nocardiosis diagnosed between 1997 and 2014. Population-based incidences were calculated using district population data. Results: Clinically significant nocardiosis was identified in sixty-one patients. The unadjusted population-based annual incidence of nocardiosis was 2.02 (95% confidence interval [CI] 1.55-2.60) per 100,000 people and was 1.7 (95% CI 0.96-2.90) fold higher in Indigenous compared with non-Indigenous persons (p=0.027). Of 61 patients, 47 (77%) had chronic lung disease, diabetes and/or hazardous alcohol consumption; 22 (36%) were immunocompromised; and 8 (13%) had no identified comorbidities. Disease presentations included pulmonary (69%; 42/61), cutaneous (13%, 8/61) and disseminated nocardiosis (15%, 9/61). The most commonly identified species were N. asteroides and N. cyriacigeorgica (each 11%). Linezolid was the only antimicrobial to which isolates were universally susceptible; 89% (48/54), 60% (32/53) and 48% (26/54) of isolates were susceptible to trimethoprim-sulfamethoxazole, ceftriaxone and imipenem, respectively. 18 patients (30%) required intensive care unit (ICU) admission and one-year mortality was 31%. Conclusions: The incidence of nocardiosis in tropical Australia is amongst the highest reported globally. Nocardiosis occurs in both immunocompromised and immunocompetent hosts, and is associated with high rates of ICU-admission, 1-year mortality and resistance to commonly-recommended antimicrobials. Diagnosis should be considered in patients with consistent clinical features, particularly if they are Indigenous or have chronic lung disease.
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2016 |
Magin PJ, Morgan S, Tapley A, Davis JS, McArthur L, Henderson KM, et al., 'Reducing general practice trainees' antibiotic prescribing for respiratory tract infections: An evaluation of a combined face-To-face workshop and online educational intervention', Education for Primary Care, 27 98-105 (2016) [C1]
Over-prescription of antibiotics for non-pneumonia respiratory tract infections (RTIs) is a major concern in general practice. Australian general practice registrars (trainees) ha... [more]
Over-prescription of antibiotics for non-pneumonia respiratory tract infections (RTIs) is a major concern in general practice. Australian general practice registrars (trainees) have inappropriately high rates of prescription of antibiotics for RTIs. The 'apprenticeship' educational model and the trainee- trainer relationship are drivers of this inappropriate prescribing. We aimed to reduce registrars' non-pneumonia RTI antibiotic prescribing via an educational intervention (a 90-min face-To-face workshop supported by online modules), complemented by delivery of the same intervention, separately, to their trainers. We conducted a pre-and post-intervention comparison of the registrars' intention to prescribe antibiotics for common RTIs using McNemar's test. We similarly tested changes in supervisors' intended prescribing. Prescribing intentions were elicited by responses to six written clinical vignettes (upper respiratory tract infection, otitis media, sore throat and three acute bronchitis vignettes). We found that, for registrars, there were statistically significant reductions in antibiotic prescribing for the sore throat (24.0% absolute reduction), otitis media (17.5% absolute reduction) and two of the three acute bronchitis (12.0% and 18.0% absolute reduction) vignettes. There were significant reductions in supervisors' antibiotic prescribing intentions for the same four vignettes. We conclude that our intervention produced a significant change in registrars' intention to prescribe antibiotics for non-pneumonia RTIs.
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Nova |
2016 |
Jones CA, Davis JS, Looke DFM, 'The ASID test The Australasian Society for Infectious Diseases view on infectious diseases challenges in 2016 and beyond', MEDICAL JOURNAL OF AUSTRALIA, 204 250-+ (2016)
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2016 |
McGuinness SL, Whiting SE, Baird R, Currie BJ, Ralph AP, Anstey NM, et al., 'Nocardiosis in the Tropical Northern Territory of Australia, 1997-2014.', Open Forum Infect Dis, 3 (2016) [C1]
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Nova |
2016 |
Roberts JA, Abdul-Aziz MH, Davis JS, Dulhunty JM, Cotta MO, Myburgh J, et al., 'Continuous versus intermittent ß-lactam infusion in severe sepsis: A meta-analysis of individual patient data from randomized trials', American Journal of Respiratory and Critical Care Medicine, 194 681-691 (2016) [C1]
Rationale: Optimization of ß-lactam antibiotic dosing for critically ill patients is an intervention that may improve outcomes in severe sepsis. Objectives: In this individual pat... [more]
Rationale: Optimization of ß-lactam antibiotic dosing for critically ill patients is an intervention that may improve outcomes in severe sepsis. Objectives: In this individual patient data meta-analysis of critically ill patients with severe sepsis, we aimed to compare clinical outcomes of those treated with continuous versus intermittent infusion of ß-lactam antibiotics. Methods: We identified relevant randomized controlled trials comparing continuous versus intermittent infusion of ß-lactam antibiotics in critically ill patients with severe sepsis. We assessed the quality of the studies according to four criteria. We combined individual patient data from studies and assessed data integrity for common baseline demographics and study endpoints, including hospital mortality censored at 30 days and clinical cure. We then determined the pooled estimates of effect and investigated factors associated with hospital mortality in multivariable analysis. Measurements and Main Results: We identified three randomized controlled trials in which researchers recruited a total of 632 patients with severe sepsis. The two groups were well balanced in terms of age, sex, and illness severity. The rates of hospital mortality and clinical cure for the continuous versus intermittent infusion groups were 19.6% versus 26.3% (relative risk, 0.74; 95% confidence interval, 0.56-1.00; P = 0.045) and 55.4% versus 46.3% (relative risk, 1.20; 95% confidence interval, 1.03-1.40; P = 0.021), respectively. In a multivariable model, intermittent ß-lactam administration, higher Acute Physiology and Chronic Health Evaluation II score, use of renal replacement therapy, and infection by nonfermenting gram-negative bacilli were significantly associated with hospital mortality. Continuous ß-lactam administration was not independently associated with clinical cure. Conclusions: Compared with intermittent dosing, administration of ß-lactamantibioticsby continuous infusionincritically ill patientswith severe sepsis is associated with decreased hospital mortality.
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Nova |
2016 |
Davis JS, Sud A, O'Sullivan MVN, Robinson JO, Ferguson PE, Foo H, et al., 'Combination of Vancomycin and ß-Lactam Therapy for Methicillin-Resistant Staphylococcus aureus Bacteremia: A Pilot Multicenter Randomized Controlled Trial', Clinical Infectious Diseases, 62 173-180 (2016) [C1]
Background. In vitro laboratory and animal studies demonstrate a synergistic role for the combination of vancomycin and antistaphylococcal ß-lactams for methicillin-resistant Stap... [more]
Background. In vitro laboratory and animal studies demonstrate a synergistic role for the combination of vancomycin and antistaphylococcal ß-lactams for methicillin-resistant Staphylococcus aureus (MRSA) bacteremia. Prospective clinical data are lacking. Methods. In this open-label, multicenter, clinical trial, adults with MRSA bacteremia received vancomycin 1.5 g intravenously twice daily and were randomly assigned (1:1) to receive intravenous flucloxacillin 2 g every 6 hours for 7 days (combination group) or no additional therapy (standard therapy group). Participants were stratified by hospital and randomized in permuted blocks of variable size. Randomization codes were kept in sealed, sequentially numbered, opaque envelopes. The primary outcome was the duration of MRSA bacteremia in days. Results. We randomly assigned 60 patients to receive vancomycin (n = 29), or vancomycin plus flucloxacillin (n = 31). The mean duration of bacteremia was 3.00 days in the standard therapy group and 1.94 days in the combination group. According to a negative binomial model, the mean time to resolution of bacteremia in the combination group was 65% (95% confidence interval, 41%-102%; P =. 06) that in the standard therapy group. There was no difference in the secondary end points of 28- and 90-day mortality, metastatic infection, nephrotoxicity, or hepatotoxicity. Conclusions. Combining an antistaphylococcal ß-lactam with vancomycin may shorten the duration of MRSA bacteremia. Further trials with a larger sample size and objective clinically relevant end points are warranted. Australian New Zealand Clinical Trials Registry: ACTRN12610000940077 (www.anzctr.org.au).
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Nova |
2016 |
Jones CA, Davis JS, Looke DFM, 'The ASID test', MEDICAL JOURNAL OF AUSTRALIA, 204 250-251 (2016)
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2016 |
McAuliffe GN, Baird RW, Hennessy J, Anstey NM, Davis JS, 'MALDI-TOF MS for identification of community-acquired Acinetobacter baumannii complex infections', PATHOLOGY, 48 100-102 (2016)
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2015 |
Silva C, Ianna E, Jones T, Davis JS, 'Should patients with hepatitis C genotype 2/3 infection who are slow responders to pegylated interferon/ribavirin have treatment duration extended?', Hepatology, 62 660-661 (2015) [C3]
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2015 |
Dulhunty JM, Roberts JA, Davis JS, Webb SAR, Bellomo R, Gomersall C, et al., 'A Multicenter Randomized Trial of Continuous versus Intermittent ß-Lactam Infusion in Severe Sepsis.', American journal of respiratory and critical care medicine, 192 1298-1305 (2015) [C1]
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Nova |
2015 |
Davis JS, Van Hal S, Tong SYC, 'Combination Antibiotic Treatment of Serious Methicillin-Resistant Staphylococcus aureus Infections', SEMINARS IN RESPIRATORY AND CRITICAL CARE MEDICINE, 36 3-16 (2015) [C1]
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Nova |
2015 |
Holmes NE, Tong SYC, Davis JS, van Hal SJ, 'Treatment of Methicillin-Resistant Staphylococcus aureus: Vancomycin and Beyond', SEMINARS IN RESPIRATORY AND CRITICAL CARE MEDICINE, 36 17-30 (2015) [C1]
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Nova |
2015 |
Gear RJ, Carter JC, Carapetis JR, Baird R, Davis JS, 'Changes in the clinical and epidemiological features of group A streptococcal bacteraemia in Australia's Northern Territory', TROPICAL MEDICINE & INTERNATIONAL HEALTH, 20 40-47 (2015) [C1]
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Nova |
2015 |
Blyth CC, Walls T, Cheng AC, Murray RJ, Fisher DA, Ingram PR, Davis JS, 'A comparison of paediatric and adult infectious diseases consultations in Australia and New Zealand', European Journal of Clinical Microbiology and Infectious Diseases, (2015) [C1]
The objective of this paper is to describe paediatric infectious diseases consultations across Australia and New Zealand. We surveyed infectious diseases physicians at 51 hospital... [more]
The objective of this paper is to describe paediatric infectious diseases consultations across Australia and New Zealand. We surveyed infectious diseases physicians at 51 hospitals over a period of 2 weeks in 2012. Compared with adult consults, paediatric consults were more frequently received from general paediatricians/physicians and intensive care, yet less frequently from surgeons and emergency. Respiratory, skin/soft tissue and bone/joint infections were the most frequent consultations in children. These data demonstrate the breadth of formal infectious diseases consults in children. Differences between paediatric and infectious diseases consultations need to be considered when planning both paediatric and adult physician training and future curriculum development.
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Nova |
2015 |
Tsai D, Jamal JA, Davis JS, Lipman J, Roberts JA, 'Interethnic Differences in Pharmacokinetics of Antibacterials', Clinical Pharmacokinetics, 54 243-260 (2015) [C1]
Background: Optimal antibacterial dosing is imperative for maximising clinical outcome. Many factors can contribute to changes in the pharmacokinetics of antibacterials to the ext... [more]
Background: Optimal antibacterial dosing is imperative for maximising clinical outcome. Many factors can contribute to changes in the pharmacokinetics of antibacterials to the extent where dose adjustment may be needed. In acute illness, substantial changes in important pharmacokinetic parameters such as volume of distribution and clearance can occur for certain antibacterials. The possibility of interethnic pharmacokinetic differences can further complicate attempts to design an appropriate dosing regimen. Factors of ethnicity, such as genetics, body size and fat distribution, contribute to differences in absorption, distribution, metabolism and elimination of drugs. Despite extensive previous work on the altered pharmacokinetics of antibacterials in some patient groups such as the critically ill, knowledge of interethnic pharmacokinetic differences for antibacterials is limited. Objectives: This systematic review aims to describe any pharmacokinetic differences in antibacterials between different ethnic groups, and discuss their probable mechanisms as well as any clinical implications. Methods: We performed a structured literature review to identify and describe available data of the interethnic differences in the pharmacokinetics of antibacterials. Results: We found 50 articles that met our inclusion criteria and only six of these compared antibacterial pharmacokinetics between different ethnicities within the same study. Overall, there was limited evidence available. We found that interethnic pharmacokinetic differences are negligible for carbapenems, most ß-lactams, aminoglycosides, glycopeptides, most fluoroquinolones, linezolid and daptomycin, whereas significant difference is likely for ciprofloxacin, macrolides, clindamycin, tinidazole and some cephalosporins. In general, subjects of Asian ethnicity achieve drug exposures up to two to threefold greater than Caucasian counterparts for these antibacterials. This difference is caused by a comparatively lower volume of distribution and/or drug clearance. Conclusion: Interethnic pharmacokinetic differences of antibacterials are likely; however, the clinical relevance of these differences is unknown and warrants further research.
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Nova |
2015 |
Commons RJ, Robinson CH, Gawler D, Davis JS, Price RN, 'High burden of diabetic foot infections in the top end of Australia: An emerging health crisis (DEFINE study)', DIABETES RESEARCH AND CLINICAL PRACTICE, 110 147-157 (2015) [C1]
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Nova |
2015 |
Davies J, Bukulatjpi S, Sharma S, Caldwell L, Johnston V, Davis JS, 'Development of a Culturally Appropriate Bilingual Electronic App About Hepatitis B for Indigenous Australians: Towards Shared Understandings.', JMIR Research Protocols, 4 (2015) [C1]
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Nova |
2015 |
Tong SYC, Davis JS, Eichenberger E, Holland TL, Fowler VG, 'Staphylococcus aureus infections: Epidemiology, pathophysiology, clinical manifestations, and management', Clinical Microbiology Reviews, 28 603-661 (2015) [C1]
Staphylococcus aureus is a major human pathogen that causes a wide range of clinical infections. It is a leading cause of bacteremia and infective endocarditis as well as osteoart... [more]
Staphylococcus aureus is a major human pathogen that causes a wide range of clinical infections. It is a leading cause of bacteremia and infective endocarditis as well as osteoarticular, skin and soft tissue, pleuropulmonary, and device-related infections. This review comprehensively covers the epidemiology, pathophysiology, clinical manifestations, and management of each of these clinical entities. The past 2 decades have witnessed two clear shifts in the epidemiology of S. aureus infections: first, a growing number of health care-associated infections, particularly seen in infective endocarditis and prosthetic device infections, and second, an epidemic of community-associated skin and soft tissue infections driven by strains with certain virulence factors and resistance to ß-lactam antibiotics. In reviewing the literature to support management strategies for these clinical manifestations, we also highlight the paucity of high-quality evidence for many key clinical questions.
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Nova |
2014 |
Davis JS, McMillan M, Swaminathan A, Kelly JA, Piera KE, Baird RW, et al., 'A 16-Year Prospective Study of Community-Onset Bacteremic
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Nova |
2014 |
Davis JS, He V, Anstey NM, Condon JR, 'Long Term Outcomes Following Hospital Admission for Sepsis Using Relative Survival Analysis: A Prospective Cohort Study of 1,092 Patients with 5 Year Follow Up', PLOS ONE, 9 (2014) [C1]
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Nova |
2014 |
Engelman D, Hofer A, Davis JS, Carapetis JR, Baird RW, Giffard PM, et al., 'Invasive Staphylococcus aureus infections in children in tropical northern Australia', Journal of the Pediatric Infectious Diseases Society, 3 304-311 (2014)
Background. Despite a high burden of staphylococcal skin disease in children and high incidence of Staphylococcus aureus bacteremia in adult Indigenous populations in northern Aus... [more]
Background. Despite a high burden of staphylococcal skin disease in children and high incidence of Staphylococcus aureus bacteremia in adult Indigenous populations in northern Australia, there are few studies describing incidence or clinical information of invasive S aureus (ISA) infections in children. Methods. We conducted a retrospective review for all cases of S aureus bacteremia and sterile site infections, for children under 15 years, in northern Australia over a 4-year period (2007-2010). Cases were categorized as neonatal (<28 days) and pediatric (=28 days). Results. Forty-four cases (9 neonatal, 35 pediatric)were identified.The annual incidence of ISAwas 27.9 cases per 100 000 population. Among pediatric cases, the annual incidencewas significantly higher in the Indigenous (46.6) compared with the non-Indigenous (4.4) population (IRR: 10.6 [95%confidence interval, 3.8-41.4]). Pediatric infectionswere predominantly community-associated (86%).Clinical infection sites included osteoarticular (66%), pleuropulmonary (29%), and endocarditis (9%), and multifocal diseasewas common (20%). Eighty-three percent of pediatric cases presented with sepsis; 34%resulted in intensive care admission. Neonatal cases were all born prematurely; 89%were late-onset infections. Overall, 27%of infections were due to methicillin-resistant S aureus (MRSA).Comparedwithmethicillin-sensitive S aureus(MSSA), therewasnodifference in severityorpresentation in pediatricMRSA cases, but a higher proportion ofMRSA cases were readmitted. Conclusions. The annual incidence of ISA infection in this study is among the highest described, largely due to a disproportionate burden in Indigenous children. Infections are frequently severe and infection with MRSA is common. Children presenting with suspected ISA in this region should be treated empirically for MRSA.
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2014 |
Littlejohn M, Davies J, Yuen L, Edwards R, Sozzi T, Jackson K, et al., 'Molecular virology of hepatitis B virus, sub-genotype C4 in northern Australian Indigenous populations', Journal of Medical Virology, 86 695-706 (2014)
Indigenous Australians experience a significant health burden from chronic hepatitis B infection; however, the strain of hepatitis B virus (HBV) found among Indigenous Australians... [more]
Indigenous Australians experience a significant health burden from chronic hepatitis B infection; however, the strain of hepatitis B virus (HBV) found among Indigenous Australians has not been well characterized. Blood samples were collected from 65 Indigenous Australians with chronic HBV infection from across the Top End of Australia's Northern Territory. Phylogenetic analysis of HBV from these samples revealed that 100% of the isolates were genotype C, sub-genotype C4, expressing the serotype ayw3. This strain is a divergent group within the HBV/C genotype, and has only been described in Indigenous Australians. Evidence of recombination was suggested by discordant phylogenetic clustering of the C4 sequences when comparing the full genome to the surface region and confirmed by recombination analysis which showed the surface gene region to be most closely related to genotype J, while the remaining regions of the genome were most similar to genotype C sequences. Mutational analysis revealed the presence of multiple mutations that have been linked with more rapid liver disease progression and an increased risk of hepatocellular carcinoma. These mutations were detected in the majority of sequences examined. Variants associated with vaccine failure were detected as the predominant viral quasi-species in 3/35 samples. In summary, the HBV C4 variant found in this population has a high potential to cause advanced liver disease and to escape vaccination programs. Further in vitro functional and natural history studies are warranted in order to determine the clinical and public health consequences of infection with the HBV C4 variant in these communities. © 2014 Wiley Periodicals, Inc.
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2014 |
Hewagama S, Krishnaswamy S, King L, Davis J, Baird R, 'Human T-cell lymphotropic virus type 1 exposures following blood-borne virus incidents in Central Australia, 2002-2012', Clinical Infectious Diseases, 59 85-87 (2014)
We retrospectively audited hospital occupational exposure events over a 10-year period, in a human T-cell lymphotropic virus type 1 (HTLV-1)-endemic area of Central Australia, and... [more]
We retrospectively audited hospital occupational exposure events over a 10-year period, in a human T-cell lymphotropic virus type 1 (HTLV-1)-endemic area of Central Australia, and report on 53 individuals exposed to HTLV-1 with no transmissions documented (95% confidence interval, 0%-1.5%). This has important implications for the management of exposures including the role of postexposure prophylaxis. © The Author 2014.
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2014 |
Davies J, Bukulatjpi S, Sharma S, Davis J, Johnston V, '"Only your blood can tell the story" - A qualitative research study using semi-structured interviews to explore the hepatitis B related knowledge, perceptions and experiences of remote dwelling Indigenous Australians and their health care providers in northern Australia', BMC Public Health, 14 (2014)
Background: Hepatitis B is endemic in the Indigenous communities of the Northern Territory of Australia and significantly contributes to liver-related morbidity and mortality. It ... [more]
Background: Hepatitis B is endemic in the Indigenous communities of the Northern Territory of Australia and significantly contributes to liver-related morbidity and mortality. It is recognised that low health literacy levels, different worldviews and English as a second language all contribute to the difficulties health workers often have in explaining biomedical health concepts, relevant to hepatitis B infection, to patients. The aim of this research project was to explore the knowledge, perceptions and experiences of remote dwelling Indigenous adults and their health care providers relating to hepatitis B infection with a view to using this as the evidence base to develop a culturally appropriate educational tool. Methods: The impetus for this project came from health clinic staff at a remote community in Arnhem Land in the Northern Territory, in partnership with a visiting specialist liver clinic from the Royal Darwin Hospital. Participants were clinic patients with hepatitis B (n = 12), community members (n = 9) and key informants (n = 13); 25 were Indigenous individuals. A participatory action research project design was used with purposive sampling to identify participants. Semi-structured interviews were undertaken to explore: current understanding of hepatitis B, desire for knowledge, and perspectives on how people could acquire the information needed. All individuals were offered the use of an interpreter. The data were examined using deductive and inductive thematic analysis. Results: Low levels of biomedical knowledge about Hepatitis B, negative perceptions of Hepatitis B, communication (particularly language) and culture were the major themes that emerged from the data. Accurate concepts grounded in Indigenous culture such as "only your blood can tell the story" were present but accompanied by a feeling of disempowerment due to perceived lack of "medical" understanding, and informed partnerships between caregiver and patient. Culturally appropriate discussions in a patient's first language using visual aids were identified as vital to improving communication. Conclusions: Having an educational tool in Indigenous patient's first language is crucial in developing treatment partnerships for Indigenous patients with hepatitis B. Using a culturally appropriate worldview as the foundation for development should help to reduce disempowerment and improve health literacy.
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2014 |
Darcy CJ, Minigo G, Piera KA, Davis JS, McNeil YR, Chen Y, et al., 'Neutrophils with myeloid derived suppressor function deplete arginine and constrain T cell function in septic shock patients', CRITICAL CARE, 18 (2014) [C1]
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Nova |
2014 |
Parker C, Tong SYC, Dempsey K, Condon J, Sharma SK, Chen JWC, et al., 'Hepatocellular carcinoma in Australia's Northern Territory: high incidence and poor outcome', MEDICAL JOURNAL OF AUSTRALIA, 201 470-474 (2014) [C1]
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2014 |
Ingram PR, Cheng AC, Murray RJ, Blyth CC, Walls T, Fisher DA, Davis JS, 'What do infectious diseases physicians do? A 2-week snapshot of inpatient consultative activities across Australia, New Zealand and Singapore', CLINICAL MICROBIOLOGY AND INFECTION, 20 O737-O744 (2014) [C1]
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Nova |
2014 |
Jeremiah CJ, Wills C, Bayly A, Perry GJ, Davis JS, Tong SY, Currie BJ, 'VANCOMYCIN DOSING NOMOGRAM FOR HAEMODIALYSIS PATIENTS', NEPHROLOGY, 19 513-514 (2014) [C3]
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Nova |
2014 |
Darcy CJ, Woodberry T, Davis JS, Piera KA, McNeil YR, Chen Y, et al., 'Increased plasma arginase activity in human sepsis: association with increased circulating neutrophils', CLINICAL CHEMISTRY AND LABORATORY MEDICINE, 52 573-581 (2014) [C1]
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Nova |
2013 |
Davis JS, Kulatunga AC, Hajkowicz K, 'Outcomes for Indigenous and non-Indigenous patients who access treatment for hepatitis C in the Top End of the Northern Territory', MEDICAL JOURNAL OF AUSTRALIA, 199 23-23 (2013)
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2013 |
Deans AK, Boerma CJ, Fordyce J, De Souza M, Palmer DJ, Davis JS, 'Use of Royal Darwin Hospital emergency department by immigration detainees in 2011', MEDICAL JOURNAL OF AUSTRALIA, 199 776-778 (2013) [C1]
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2013 |
Pitman MC, Anstey NM, Davis JS, 'Eosinophils in Severe Sepsis in Northern Australia: Do the Usual Rules Apply in the Tropics?', CRITICAL CARE MEDICINE, 41 E286-E288 (2013) [C1]
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2013 |
Davies J, Littlejohn M, Locarnini SA, Whiting S, Hajkowicz K, Cowie BC, et al., 'The molecular epidemiology of hepatitis B in the Indigenous people of northern Australia', JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, 28 1234-1241 (2013)
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2013 |
Dulhunty JM, Roberts JA, Davis JS, Webb SAR, Bellomo R, Gomersall C, et al., 'Continuous Infusion of Beta-Lactam Antibiotics in Severe Sepsis: A Multicenter Double-Blind, Randomized Controlled Trial', CLINICAL INFECTIOUS DISEASES, 56 236-244 (2013) [C1]
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2013 |
Dulhunty JM, Roberts JA, Davis JS, Webb SAR, Bellomo R, Gomersall C, et al., 'Reply to Soman et al', CLINICAL INFECTIOUS DISEASES, 57 323-+ (2013)
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2013 |
Davies J, Tong SYC, Davis JS, 'Hepatitis D is rare or non-existent in hepatitis B virus-infected Indigenous Australians in the Northern Territory', AUSTRALIAN AND NEW ZEALAND JOURNAL OF PUBLIC HEALTH, 37 188-189 (2013)
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2013 |
Dulhunty JM, Roberts JA, Davis JS, Webb SAR, Bellomo R, Gomersall C, et al., 'A protocol for a multicentre randomised controlled trial of continuous beta-lactam infusion compared with intermittent beta-lactam dosing in critically ill patients with severe sepsis: the BLING II study', CRITICAL CARE AND RESUSCITATION, 15 179-185 (2013)
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2013 |
Davis JS, McGloughlin S, Tong SYC, Walton SF, Currie BJ, 'A Novel Clinical Grading Scale to Guide the Management of Crusted Scabies', PLOS NEGLECTED TROPICAL DISEASES, 7 (2013)
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2012 |
Harding DJ, Subramaniam K, MacQuillan G, Davis J, Nolan D, 'Severe drug-induced hypersensitivity syndrome with a shared HLA-B allele', MEDICAL JOURNAL OF AUSTRALIA, 197 411-413 (2012)
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2012 |
Davis JS, 'Assessing fever in the returned traveller', AUSTRALIAN PRESCRIBER, 35 142-142 (2012) |
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2012 |
Whelan P, Huy N, Hajkowicz K, Davis J, Smith D, Pyke A, et al., 'Evidence in Australia for a Case of Airport Dengue', PLOS NEGLECTED TROPICAL DISEASES, 6 (2012)
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2012 |
Gordon CL, Whiting S, Haran G, Ward A, Coleman M, Baird R, et al., 'Entomophthoromycosis caused by Basidiobolus ranarum in tropical northern Australia', PATHOLOGY, 44 375-379 (2012)
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2012 |
Davies J, Gordon CL, Tong SYC, Baird RW, Davis JS, 'Impact of Results of a Rapid
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2012 |
Robins-Browne KL, Cheng AC, Thomas KAS, Palmer DJ, Currie BJ, Davis JS, 'The SMART-COP score performs well for pneumonia risk stratification in Australia's Tropical Northern Territory: a prospective cohort study', TROPICAL MEDICINE & INTERNATIONAL HEALTH, 17 914-919 (2012)
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2011 |
Davis JS, Cheng AC, McMillan M, Humphrey AB, Stephens DP, Anstey NM, 'Sepsis in the tropical Top End of Australia's Northern Territory: disease burden and impact on Indigenous Australians', MEDICAL JOURNAL OF AUSTRALIA, 194 519-524 (2011)
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2011 |
Davis JS, Anstey NM, 'Is plasma arginine concentration decreased in patients with sepsis? A systematic review and meta-analysis', CRITICAL CARE MEDICINE, 39 380-385 (2011)
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2011 |
White HA, Davis JS, Kittler P, Currie BJ, 'Outpatient parenteral antimicrobial therapy-treated bone and joint infections in a tropical setting', INTERNAL MEDICINE JOURNAL, 41 668-673 (2011)
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2011 |
Davis JS, Darcy CJ, Yeo TW, Jones C, McNeil YR, Stephens DP, et al., 'Asymmetric Dimethylarginine, Endothelial Nitric Oxide Bioavailability and Mortality in Sepsis', PLOS ONE, 6 (2011)
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2011 |
Darcy CJ, Davis JS, Woodberry T, McNeil YR, Stephens DP, Yeo TW, Anstey NM, 'An Observational Cohort Study of the Kynurenine to Tryptophan Ratio in Sepsis: Association with Impaired Immune and Microvascular Function', PLOS ONE, 6 (2011)
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2010 |
Bilgrami I, Roberts JA, Wallis SC, Thomas J, Davis J, Fowler S, et al., 'Meropenem Dosing in Critically Ill Patients with Sepsis Receiving High-Volume Continuous Venovenous Hemofiltration', ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 54 2974-2978 (2010)
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2010 |
Dent E, Selvey CE, Bell A, Davis J, McDonald MI, 'Incomplete protection against hepatitis B among remote Aboriginal adolescents despite full vaccination in infancy.', Communicable diseases intelligence, 34 435-439 (2010)
The objective of this study was to determine long-term immunity to hepatitis B virus (HBV) in a cohort of adolescents who received plasma-derived HBV vaccine in 1989 and 1990 in a... [more]
The objective of this study was to determine long-term immunity to hepatitis B virus (HBV) in a cohort of adolescents who received plasma-derived HBV vaccine in 1989 and 1990 in a remote Australian Aboriginal community. This was done using a serological survey; primary outcome measures were cut-off titres of HBsAb, and the presence of HBcAb and/or HBsAg. Of 37 adolescents in the cohort, 4 (11%) had evidence of active infection, one with abnormal liver enzymes, 7 (19%) had evidence of past infection, 15 (41%) were HBsAb positive in low titre and 11 (30%) were classed as immune. It was concluded that there was relatively poor long-term serological immunity to HBV vaccination in this group; a finding which is in keeping with similar studies in Indigenous and remote populations elsewhere. This finding raises the concern that a significant proportion of Aboriginal adolescents in other remote communities (vaccinated in 1989 and 1990) were not adequately protected by the vaccine. If so, there will be an unexpected burden of chronic HBV infection in these settings and a substantial group who are non-immune, despite having received complete HBV vaccination courses as infants. The authors recommend followup serosurveys in remote Aboriginal communities to identify people with low HBsAb titres, especially those without an adequate anamnestic response to another dose of HBV vaccine. In addition, community-based active surveillance programs will be required to detect people with chronic HBV infection and provide access to monitoring and appropriate treatment.
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2010 |
Markey PG, Davis JS, Harnett GB, Williams SH, Speers DJ, 'Meningitis and a Febrile Vomiting Illness Caused by Echovirus Type 4, Northern Territory, Australia', EMERGING INFECTIOUS DISEASES, 16 63-68 (2010)
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2010 |
McMillan M, Davis JS, 'Acute hospital admission for sepsis: an important but under-utilised opportunity for smoking cessation interventions', AUSTRALIAN AND NEW ZEALAND JOURNAL OF PUBLIC HEALTH, 34 432-433 (2010)
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2010 |
Davis JS, Cross GB, Charles PGP, Currie BJ, Anstey NM, Cheng AC, 'Pneumonia risk stratification in tropical Australia: does the SMART-COP score apply?', MEDICAL JOURNAL OF AUSTRALIA, 192 133-136 (2010)
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2010 |
Davis JS, Cheng AC, Currie BJ, Anstey NM, 'Pneumonia risk stratification in tropical Australia: does the SMART-COP score apply? Reply', MEDICAL JOURNAL OF AUSTRALIA, 192 543-543 (2010) |
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2010 |
Flint SM, Davis JS, Su J-Y, Oliver-Landry EP, Rogers BA, Goldstein A, et al., 'Disproportionate impact of pandemic (H1N1) 2009 influenza on Indigenous people in the Top End of Australia's Northern Territory', MEDICAL JOURNAL OF AUSTRALIA, 192 617-622 (2010)
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2010 |
Davis JS, Cheng AC, Currie BJ, Anstey NM, 'In reply', Medical Journal of Australia, 192 543 (2010) |
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2010 |
Winter S, Thomas JH, Stephens DP, Davis JS, 'Particulate face masks for protection against airborne pathogens - one size does not fit all: an observational study', CRITICAL CARE AND RESUSCITATION, 12 24-27 (2010)
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2010 |
Carroll E, Page W, Davis JS, 'Screening for hepatitis B in East Arnhem Land: a high prevalence of chronic infection despite incomplete screening', INTERNAL MEDICINE JOURNAL, 40 784-787 (2010)
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2010 |
Davis JS, Yeo TW, Piera KA, Woodberry T, Celermajer DS, Stephens DP, Anstey NM, 'Angiopoietin-2 is increased in sepsis and inversely associated with nitric oxide-dependent microvascular reactivity', CRITICAL CARE, 14 (2010)
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2009 |
Davis JS, Darcy CJ, Piera K, McNeil YR, Woodberry T, Anstey NM, 'Ex-vivo changes in amino acid concentrations from blood stored at room temperature or on ice: implications for arginine and taurine measurements', BMC CLINICAL PATHOLOGY, 9 (2009)
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2009 |
Murray RJ, Davis JS, Burgner DP, 'The Australasian Society for Infectious Diseases guidelines for the diagnosis, management and prevention of infections in recently arrived refugees: an abridged outline', MEDICAL JOURNAL OF AUSTRALIA, 190 421-425 (2009)
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2009 |
Charles PGP, Davis JS, Grayson ML, 'Rocket Science and the Infectious Diseases Society of America/American Thoracic Society (IDSA/ATS) Guidelines for Severe Community-Acquired Pneumonia', CLINICAL INFECTIOUS DISEASES, 48 1796-1796 (2009)
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2009 |
Davis JS, Yeo TW, Thomas JH, McMillan M, Darcy CJ, McNeil YR, et al., 'Sepsis-associated microvascular dysfunction measured by peripheral arterial tonometry: an observational study', CRITICAL CARE, 13 (2009)
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2008 |
Davis J, 'Preventing hepatitis B virus reactivation following immunosuppressive therapy', INTERNAL MEDICINE JOURNAL, 38 617-617 (2008)
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2008 |
Kaufman J, Davis J, Krause V, 'Influenza immunisation of doctors at an Australian tertiary hospital: immunisation rate and factors contributing to uptake.', Communicable diseases intelligence, 32 443-448 (2008)
Immunisation of health care workers against influenza reduces influenza-related morbidity and mortality of hospital inpatients and staff absenteeism. Uptake of influenza vaccinati... [more]
Immunisation of health care workers against influenza reduces influenza-related morbidity and mortality of hospital inpatients and staff absenteeism. Uptake of influenza vaccination amongst hospital doctors is generally inadequate, and factors contributing to influenza vaccine uptake among doctors have not been well defined. We performed an audit of doctors at an Australian hospital to establish the rate of and the factors contributing to influenza immunisation uptake. The audit was conducted by delivering a survey to doctors for self-completion at major departmental meetings. Of 243 doctors employed at the hospital, 150 completed the survey (response rate 62%), of whom only 28% received influenza immunisation in 2007 and 44% in any prior year. Doctors immunised in 2007 were of an older age (39.1 vs. 34.7 years, P = 0.01) and level of seniority (odds ratio for consultant vs. more junior staff = 2.9, P = 0.02) than those not immunised. Doctors who had ever been immunised had a better knowledge about influenza than those never immunised (odds ratio for high knowledge score 4.2, P < 0.001). The most common reasons cited for not being immunised in 2007 were being too busy, immunisation not being offered conveniently and not being aware how to access the vaccine. Immunisation rates among doctors in this study are inadequate. A perceived lack of convenience of the immunisation service and poor knowledge about influenza vaccination are the major contributing factors. Efforts to improve influenza immunisation uptake amongst hospital doctors should focus on education, and on innovative strategies to make immunisation more convenient and accessible specifically for doctors.
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2007 |
Benson J, Davis J, 'Malaria in the Australian refugee population', AUSTRALIAN FAMILY PHYSICIAN, 36 639-+ (2007)
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2005 |
Davis JS, 'Management of bone and joint infections due to Staphylococcus aureus', INTERNAL MEDICINE JOURNAL, 35 S79-S96 (2005)
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2004 |
Davis JS, Bourke P, 'Rhabdomyolysis associated with dengue virus infection', CLINICAL INFECTIOUS DISEASES, 38 E109-E111 (2004)
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2004 |
Davis JS, 'High-dose riboflavin for the prevention of migraine: can we afford to ignore it?', INTERNAL MEDICINE JOURNAL, 34 372-372 (2004)
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2003 |
Cheng AC, Hanna JN, Norton R, Hills SL, Davis J, Krause VL, et al., 'Melioidosis in northern Australia, 2001-02.', Communicable diseases intelligence, 27 272-277 (2003)
Melioidosis, caused by the gram negative bacterium Burkholderia pseudomallei, is endemic in northern Australia. Using data collated from centres in Western Australia, the Northern... [more]
Melioidosis, caused by the gram negative bacterium Burkholderia pseudomallei, is endemic in northern Australia. Using data collated from centres in Western Australia, the Northern Territory and Queensland, this report describes the epidemiology of this disease between 1 November, 2001 and 31 October, 2002. There were 47 cases seen during this period with an average annual incidence of 5.8 cases per 100,000 population. In Indigenous Australians, an incidence of 25.5 cases per 100,000 population was seen. The timing and location of cases was generally correlated with rainfall across northern Australia. A case-cluster in a Queensland community was associated with post-cyclonic flooding. Risk factors included diabetes, alcohol-related problems and renal disease. Pneumonia (51%) was the most common clinical diagnosis. The mortality rate attributable to melioidosis was 21 per cent, although a number of other patients died of underlying disease. Despite improvements in recognition and treatment, melioidosis is still associated with a high morbidity and mortality, particularly in Indigenous Australians.
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2003 |
Davis JS, Currie BJ, Fisher DA, Huffam SE, Anstey NM, Price RN, et al., 'Prevention of opportunistic infections in immunosuppressed patients in the tropical top end of the Northern Territory.', Communicable diseases intelligence, 27 526-532 (2003)
The population of the Top End of the Northern Territory has a high incidence of several infections of particular significance in the immunosuppressed. The following protocol for e... [more]
The population of the Top End of the Northern Territory has a high incidence of several infections of particular significance in the immunosuppressed. The following protocol for evaluation and treatment of patients prior to immunosuppression was developed in order to reduce the incidence of serious opportunistic infections. The infections discussed are Strongyloides stercoralis, tuberculosis, scabies, chronic hepatitis B, melioidosis and other bacterial infections. We recommend that all patients planned to receive more than 0.5 mg/kg/day of prednisolone for >14 days, or any more potent immunosuppressive drug, be evaluated and treated according to this protocol. Details of the rationale, evidence base, and proposed investigations and therapy for such patients are discussed.
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2001 |
Davis JS, Boyle MJ, Hannaford R, Watson A, 'Bupropion and serum sickness-like reaction', MEDICAL JOURNAL OF AUSTRALIA, 174 479-480 (2001)
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1997 |
Howard D, Davis JS, Pugsley D, Seymour T, Hoy W, 'Morphologic correlates of renal disease in a high risk Aboriginal community.', KIDNEY INTERNATIONAL, 51 1318-1318 (1997)
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