Dr  Chantel Fitzsimmons

Dr Chantel Fitzsimmons

Postdoctoral Research Fellow

School of Biomedical Sciences and Pharmacy

Career Summary

Biography

Dr Chantel Fitzsimmons received her PhD in Medical Genetics from the University of Newcastle, Australia.

Dr Dr Fitzsimmons accepted a position in France as a post-doctoral researcher at the Centre de Recherche en Cancérologie de Lyon in 2018. Dr Fitzsimmons research focus was on a novel mechanism for activating the innate immune system and evaluating the effects on tumour growth/metastasis in rodents with haematological malignancies. One novel mechanism was the stimulation of the immune system by formulated LPS via liposomal delivery in preclinical studies. This was an extremely successful project that resulted in progression to clinical trials and resulted in several patents, a publication and industry collaborations.

Dr Fitzsimmons then accepted a post-doctoral researcher position at the Centre International de Recherche en Infectiologie (CIRI) in the Molecular Basis of Viral Pathogenicity Team. Her research focus was the dysregulation of the immune response by Ebola Virus infection. Dr Fitzsimmons main research goal was to understand the molecular mechanisms leading to the high pathogenicity of Ebola virus. The identification of cellular partners for the viral proteins and an understanding of the mechanisms viruses exploit to avoid different cell defence barriers as well as identification of the molecular basis of an excessive and inadequate host response to viral replication will bring to light novel information pertaining to viral pathogenesis and will ultimately lead to the development of novel antiviral drugs. Dr Fitzsimmons identified a novel pathway activated by a newly identified viral protein responsible for the excessive and dysregulated inflammatory host immune response observed during Ebola virus infection. This discovery may lead to the development of novel drugs targets improve survival rates by reducing cytokine storm-like syndrome and vascular permeability and lowering pathogenicity.

Dr Fitzsimmons returned to the University of Newcastle in 2022 as a post-doctoral fellow under Conjoint Professor Murray Cairns as part of the Centre for Complex Disease Neurobiology and Precision Medicine. Dr Fitzsimmons 

research focus is to improve our understanding of the pathogenesis of complex neuropsychiatric disorders.  Dr Fitzsimmons research utilises patient derived cerebral organoids and several molecular and phenotypic assays to test the utility of the pharmagenic enrichment strategy (PES) to identify genetically informed treatments for precision medicine in schizophrenia. The outcomes of the proposed research are highly likely to drive clinical translation that would dramatically alter the management of schizophrenia.


Qualifications

  • Doctor of Philosopy, University of Newcastle
  • Bachelor of Science (Biotechnology), University of Newcastle
  • Bachelor of Biotechnology (Honours), University of Newcastle

Keywords

  • Epigenetics
  • Liposomes
  • Molecular Basis of Viral Pathogenicity (Ebola)
  • Molecular Virology
  • Oncopharmacology
  • Pharmacogenomics
  • Psychiatric disorders
  • Schizophrenia
  • microRNA

Languages

  • French (Working)
  • English (Mother)

Fields of Research

Code Description Percentage
320211 Infectious diseases 25
321406 Pharmacogenomics 50
321104 Cancer therapy (excl. chemotherapy and radiation therapy) 25

Professional Experience

UON Appointment

Title Organisation / Department
Postdoctoral Research Fellow University of Newcastle
School of Biomedical Sciences and Pharmacy
Australia

Professional appointment

Dates Title Organisation / Department
1/2/2020 - 31/8/2021 Post-Doctoral Researcher

The research goals centre around the exploration of the molecular basis of viral pathogenicity for several highly pathogenic viruses, including the Filoviruses; Ebola and Marburg and the Paramyxoviridae Hendra and Nipah.

The main goal of our research program is to understand the molecular mechanisms leading to the high pathogenicity of Ebola, Marburg and Nipah viruses with particular emphasis on virus-host interactions during viral replication and mechanisms of viral emergence. The identification of cellular partners for the viral proteins and an understanding of the mechanisms viruses exploit to avoid different cell defence barriers as well as identification of the molecular basis of an excessive and inadequate host response to viral replication will bring to light novel information pertaining to viral pathogenesis and will ultimately lead to the development of novel antiviral drugs. For these viruses we are able to employ viral gene products as well as full length virus by molecular virology and reserve genetic approaches in order to study parameters including replication kinetics, host cell receptor usage and range and the role of viral proteins in innate immune evasion.

The Centre International de Recherche en Infectiologie (CIRI)
Volchkov V - MBVP Molecular Basis of Viral Pathogenicity
France
1/4/2018 - 1/9/2019 Post-Doctoral Researcher

The Oncopharmacology Group study the interactions between cancer drugs and tumor cells, and propose new therapeutic approaches based on the knowledge of these interactions. The group investigates different treatments (small molecules, monoclonal antibodies, antibody-drug conjugates, immunomodulators…) on different models of cell culture, co-culture, cell printing or animal models, representing both hematologic malignancies and solid tumors.

Centre de Recherche en Cancérologie de Lyon
Oncopharmacology/Anticancer Antibodies
France

Awards

Award

Year Award
2007 Australian Postgraduate Award
Australian Federal Government

Prize

Year Award
2008 The Alzheimer’s Association 2008 International Conference on Alzheimer’ Disease (ICAD) travel fellowship
International Conference on Alzheimer’ Disease (ICAD)

Scholarship

Year Award
2005 The Philip Emlyn Thomas Honours Scholarship in Environmental Studies
NEWCASTLE UNIVERSITY

Invitations

Distinguished Visitor

Year Title / Rationale
2006 MMP-mediated sLRP generation in a neural cell line

Teaching

Code Course Role Duration
HUBS 1202 Human Genomics and Biomolecular Analysis.
NEWCASTLE UNIVERSITY

The Human Genomics and Biomolecular Analysis module focuses on the relationships between structure, function and analysis of proteins and nucleic acids as applied to human disease. This course also provides an introduction to modern concepts of genomic structure, function and analysis arising from the Human Genome project.

 

Computer lab demonstrator 1/1/2007 - 1/1/2008
SCIM1040 Foundations Of Science And Technology
NEWCASTLE UNIVERSITY

Introduces students in the Bachelor of Teaching (Honours) program to the study of science and technology.

Casual Academic 1/1/2017 - 31/12/2017
HUBS 1108 Musculoskeletal Anatomy for Podiatry
NEWCASTLE UNIVERSITY

Provides an introduction to the functional anatomy of the human body with emphasis on the musculoskeletal system, thorax, abdomen, pelvis, peripheral vasculature and major nerve trunks.

Casual Academic 1/1/2017 - 31/12/2017
PHAR 6017/6213 Molecular Pathogenesis
NEWCASTLE UNIVERSITY
The Molecular Pathogenesis module was concerned with the effects of genetics on drug response utilizing systems biology, proteomics and bioinformatics in the context of a variety of human disease and therapies.
Tutor/ Assessment/Lecturing 1/1/2006 - 1/1/2009
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Publications

For publications that are currently unpublished or in-press, details are shown in italics.


Journal article (12 outputs)

Year Citation Altmetrics Link
2023 Kiltschewskij DJ, Harrison PF, Fitzsimmons C, Beilharz TH, Cairns MJ, 'Extension of mRNA poly(A) tails and 3'UTRs during neuronal differentiation exhibits variable association with post-transcriptional dynamics.', Nucleic Acids Res, 51 8181-8198 (2023) [C1]
DOI 10.1093/nar/gkad499
Citations Scopus - 3
Co-authors Dylan Kiltschewskij, Murray Cairns
2021 Mahmoudi E, Atkins JR, Quide Y, Reay WR, Cairns HM, Fitzsimmons C, et al., 'The
DOI 10.1093/schbul/sbaa123
Citations Scopus - 9Web of Science - 7
Co-authors William Reay Uon, Murray Cairns
2020 Mahmoudi E, Kiltschewskij D, Fitzsimmons C, Cairns MJ, 'Depolarization-Associated CircRNA Regulate Neural Gene Expression and in Some Cases May Function as Templates for Translation', CELLS, 9 (2020) [C1]
DOI 10.3390/cells9010025
Citations Scopus - 29Web of Science - 25
Co-authors Dylan Kiltschewskij, Murray Cairns
2020 Pinese M, Lacaze P, Rath EM, Stone A, Brion MJ, Ameur A, et al., 'The Medical Genome Reference Bank contains whole genome and phenotype data of 2570 healthy elderly', Nature Communications, 11 1-14 (2020) [C1]
DOI 10.1038/s41467-019-14079-0
Citations Scopus - 42Web of Science - 37
Co-authors Murray Cairns
2019 Mahmoudi E, Fitzsimmons C, Geaghan MP, Shannon Weickert C, Atkins JR, Wang X, Cairns MJ, 'Circular RNA biogenesis is decreased in postmortem cortical gray matter in schizophrenia and may alter the bioavailability of associated miRNA', Neuropsychopharmacology, 44 1043-1054 (2019) [C1]

Circular RNAs (circRNAs) are a covalently closed subclass of non-coding RNA molecules formed by back splicing of linear precursor RNA. These molecules are relatively stable and pa... [more]

Circular RNAs (circRNAs) are a covalently closed subclass of non-coding RNA molecules formed by back splicing of linear precursor RNA. These molecules are relatively stable and particularly abundant in the mammalian brain and therefore may participate in neural development and function. With the emergence of circRNAs activity in gene regulation, these molecules have been implicated in several biological processes, including synaptic plasticity, and we therefore suspect they may have a role in neurobehavioral disorders. Here, we profile cortical circRNAs expression in 35 postmortem cortical gray matter (BA46) schizophrenia and a non-psychiatric comparison group, using circRNA enrichment sequencing. While more than 90,000 circRNAs species were identified in the dorsolateral prefrontal cortex (DLPFC), we observed lower complexity and substantial depletion in subjects with the disorder. Although circRNAs expression was independent of their host gene transcription, alternative splicing rates were lower in samples from cases compared to controls. Gene set analysis of differentially expressed circRNAs host genes revealed significant enrichment of neural functions and neurological disorders. Many of these depleted circRNAs are also predicted to sequester miRNAs that were shown previously to be increased in the disorder, potentially exacerbating the functional impact of their dysregulation through posttranscriptional gene silencing. While this is the first reported exploration of circRNAs in schizophrenia, there is significant potential for dysregulation more broadly in other major mental illnesses and behavioral disorders. Given their capacity for modulating miRNA function, circRNA may play a significant role in the pathophysiology of disease and even be targeted for therapeutic manipulation.

DOI 10.1038/s41386-019-0348-1
Citations Scopus - 52Web of Science - 40
Co-authors Murray Cairns
2018 Quidé Y, Matosin N, Atkins JR, Fitzsimmons C, Cairns MJ, Carr VJ, Green MJ, 'Common variation in ZNF804A (rs1344706) is not associated with brain morphometry in schizophrenia or healthy participants', Progress in Neuro-Psychopharmacology and Biological Psychiatry, 82 12-20 (2018) [C1]

Background The single nucleotide polymorphism (SNP) rs1344706 [A > C] within intron 2 of the zinc finger protein 804A gene (ZNF804A) is associated with schizophrenia at the gen... [more]

Background The single nucleotide polymorphism (SNP) rs1344706 [A > C] within intron 2 of the zinc finger protein 804A gene (ZNF804A) is associated with schizophrenia at the genome-wide level, but its function in relation to the development of psychotic disorders, including its influence on brain morphology remains unclear. Methods Using both univariate (voxel-based morphometry, VBM; cortical thickness) and multivariate (source-based morphometry, SBM) approaches, we examined the effects of variation of the rs1344706 polymorphism on grey matter integrity in 214 Caucasian schizophrenia cases and 94 Caucasian healthy individuals selected from the Australian Schizophrenia Research Bank. Results Neither univariate nor multivariate analyses showed any associations between indices of grey matter and rs1344706 variation in schizophrenia or healthy participants. This was revealed in the context of the typical pattern of decreased grey matter integrity in schizophrenia compared to healthy individuals, including: (1) large grey matter volume reductions in the orbitofrontal and anterior cingulate cortices and the left fusiform/inferior temporal gyri; (2) decreased cortical thickness in the left inferior temporal and fusiform gyri, the left orbitofrontal gyrus, as well as in the right pars opercularis/precentral gyrus; and (3) decreased covariation of grey matter concentration in frontal and limbic brain regions emerging from the SBM analyses. Conclusions Contrary to some ¿ but not all ¿ previous findings, this study of a large sample of schizophrenia cases and healthy controls reveals no evidence for association between grey matter alterations and variation in rs1344706 (ZNF804A). Differences in sample sizes and ethnicities may account for discrepant findings between the present and previous studies.

DOI 10.1016/j.pnpbp.2017.12.007
Citations Scopus - 6Web of Science - 5
Co-authors Murray Cairns
2017 Fitzsimmons C, Johnstone D, Conant K, St Hillaire C, Parsons CH, Stins M, et al., 'Soluble lipoprotein receptor-related protein immunoreactive species in cell culture media and serum replacement supplements', Analytical Methods, 9 110-116 (2017) [C1]

The low-density lipoprotein receptor-related protein (LRP) is a large multifunctional cell surface membrane receptor capable of binding over 50 ligands. These include molecules im... [more]

The low-density lipoprotein receptor-related protein (LRP) is a large multifunctional cell surface membrane receptor capable of binding over 50 ligands. These include molecules important in Alzheimer's disease such as the amyloid ß-protein precursor (AßPP), the ß-amyloid (Aß) peptide and apolipoprotein E (ApoE). Full length LRP consists of a 515 kDa extracellular ligand binding a-chain and an 85 kDa membrane spanning ß-chain. A soluble form of LRP (sLRP) present in human plasma retains the ability to bind ligands, including Aß. This soluble form is an ectodomain fragment generated from the membrane bound form of the receptor by proteolytic cleavage. Here we report data demonstrating that some commercial 'serum-free' supplements and 'serum-free' media contain unlisted sLRP immunoreactive species that may reflect the presence of undefined serum protein extracts in these 'serum-free' preparations. This has the potential to interfere with experimental results and interpretation in a range of cell culture studies involving LRP or any of its ligands and possibly also other serum proteins.

DOI 10.1039/c6ay02438f
Co-authors Daniel Johnstone, Liz Milward
2017 Goldie BJ, Fitzsimmons C, Weidenhofer J, Atkins JR, Wang DO, Cairns MJ, 'miRNA Enriched in Human Neuroblast Nuclei Bind the MAZ Transcription Factor and Their Precursors Contain the MAZ Consensus Motif', FRONTIERS IN MOLECULAR NEUROSCIENCE, 10 (2017) [C1]
DOI 10.3389/fnmol.2017.00259
Citations Scopus - 4Web of Science - 4
Co-authors Judith Weidenhofer, Murray Cairns
2008 Milward AE, Kim KJ, Szklarczyk A, Nguyen T, Melli G, Nayak M, et al., 'Cleavage of myelin associated glycoprotein by matrix metalloproteinases', Journal of Neuroimmunology, 193 140-148 (2008) [C1]
DOI 10.1016/j.jneuroim.2007.11.001
Citations Scopus - 41Web of Science - 39
Co-authors Liz Milward
2007 Fitzsimmons C, McLaughlin EA, Mahony MJ, Clulow J, 'Optimisation of handling, activation and assessment procedures for Bufo marinus spermatozoa', Reproduction, Fertility and Development, 19 594-601 (2007) [C1]
DOI 10.1071/RD06124
Citations Scopus - 17Web of Science - 15
Co-authors John Clulow
2007 Szklarczyk A, Stins M, Milward AE, Ryu H, Fitzsimmons C, Sullivan D, Conant K, 'Glial activation and matrix metalloproteinase release in cerebral malaria', Journal of Neurovirology, 13 2-10 (2007) [C1]
DOI 10.1080/13550280701258084
Citations Scopus - 38Web of Science - 29
Co-authors Liz Milward
2007 Milward AE, Fitzsimmons C, Szklarczyk A, Conant K, 'The matrix metalloproteinases and CNS plasticity: An overview', Journal of Neuroimmunology, 187 9-19 (2007) [C1]
DOI 10.1016/j.jneuroim.2007.04.010
Citations Scopus - 55Web of Science - 53
Co-authors Liz Milward
Show 9 more journal articles

Conference (6 outputs)

Year Citation Altmetrics Link
2018 Reay W, Atkins J, Fitzsimmons C, Green M, Carr V, Cairns M, 'DYSREGULATION OF RETINOID SIGNALLING IN SCHIZOPHRENIA OBSERVED IN WHOLE GENOME SEQUENCE ANALYSIS', SCHIZOPHRENIA BULLETIN, Florence, ITALY (2018)
DOI 10.1093/schbul/sby017.724
Co-authors Murray Cairns, William Reay Uon
2018 Mahmoudi E, Fitzsimmons C, Geaghan M, Cairns M, 'DYSREGULATION OF CIRCULAR RNA EXPRESSION IN SCHIZOPHRENIA OBSERVED IN POSTMORTEM DORSOLATERAL PREFRONTAL CORTEX', SCHIZOPHRENIA BULLETIN, Florence, ITALY (2018)
DOI 10.1093/schbul/sby018.975
Co-authors Murray Cairns
2017 Atkins J, Gould I, Fitzsimmons C, Greene M, Tooney P, Scott R, et al., 'GENOMIC PROFILING REVEALS CNV-EQTIS IN AND AROUND THE IMPRINTED REGION OF 15Q11.2 MAY CONFER HIGHER RISK IN DEVELOPING SCHIZOPHRENIA', EUROPEAN NEUROPSYCHOPHARMACOLOGY, Toronto, CANADA (2017)
Co-authors Rodney Scott, Paul Tooney, Murray Cairns
2009 Fitzsimmons C, Johnstone DM, Conant K, Milward AE, 'Matrix metalloproteinase (MMP) - mediated cleavage of the low-density lipoprotein receptor-related protein (LRP)', ASMR XVII NSW Scientific Meeting: Programme and Abstracts, Sydney, NSW (2009) [E3]
Co-authors Liz Milward, Daniel Johnstone
2008 Fitzsimmons C, Johnstone DM, Conant K, Milward AE, 'Matrix metalloproteina-mediated cleavage of the low-density lipoprotein receptor-related protein to generate soluble species with neurodegenerative potential', Alzheimer's and Disease, Chicago, IL (2008) [E3]
Co-authors Liz Milward, Daniel Johnstone
2007 Clulow J, Fitzsimmons C, Curphey L, Mahony MJ, 'Amphibian genome cryobanking - success in sperm cryopreservation but the block to embryo cryopreservation remains', Proceedings of the 38th Annual Conference of the Society for Reproductive Biology, Christchurch, New Zealand (2007) [E3]
Co-authors John Clulow
Show 3 more conferences
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Grants and Funding

Summary

Number of grants 1
Total funding $20,000

Click on a grant title below to expand the full details for that specific grant.


20151 grants / $20,000

Emlyn and Jennie Thomas Postgraduate Medical Research Scholarship$20,000

Funding body: Hunter Medical Research Institute

Funding body Hunter Medical Research Institute
Project Team Professor Murray Cairns, Doctor Chantel Fitzsimmons, Mr Joshua Atkins
Scheme Postgraduate Research Scholarship
Role Investigator
Funding Start 2015
Funding Finish 2016
GNo G1500648
Type Of Funding Grant - Aust Non Government
Category 3AFG
UON Y
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Research Supervision

Number of supervisions

Completed2
Current0

Past Supervision

Year Level of Study Research Title Program Supervisor Type
2019 PhD Utilising High Resolution Genomics to Resolve Genetic and Epigenetic Complexity in Schizophrenia PhD (Medical Genetics), College of Health, Medicine and Wellbeing, The University of Newcastle Co-Supervisor
2019 PhD Study of miRNA and circular RNA Role and Mechanism in Synaptic Plasticity and the Pathogenesis of Schizophrenia PhD (Medical Genetics), College of Health, Medicine and Wellbeing, The University of Newcastle Co-Supervisor
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Dr Chantel Fitzsimmons

Position

Postdoctoral Research Fellow
School of Biomedical Sciences and Pharmacy
College of Health, Medicine and Wellbeing

Contact Details

Email chantel.fitzsimmons@newcastle.edu.au
Phone (02) 4921 5549

Office

Room MS615
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