Mr  Nikitas Koussis

Mr Nikitas Koussis

Casual Data Analyst

School of Psychological Sciences

Career Summary

Biography

Receiving his Bachelor of Science in 2017, Nikitas went on to work for QIMR Berghofer as a Research Assistant recruiting and scanning participants for an epilepsy project and the Prospective Imaging Study of Ageing. Alongside this, he learned computational neuroscience skills under the guidance of Prof Michael Breakspear and began a PhD in multi-modal imaging approaches to schizophrenia in 2020. He will submit in November 2023, and currently works as a data analyst for the HMRI Imaging Centre, developing software and preprocessing for large imaging datasets.

Qualifications

  • Bachelor of Science, Queens University

Keywords

  • Bayesian Modelling
  • Computational Modelling
  • Imaging
  • Neuroscience
  • Software development
  • fMRI

Languages

  • English (Mother)
  • Greek (Working)

Fields of Research

Code Description Percentage
320904 Computational neuroscience (incl. mathematical neuroscience and theoretical neuroscience) 60
520499 Cognitive and computational psychology not elsewhere classified 40

Professional Experience

Professional appointment

Dates Title Organisation / Department
1/1/2020 -  Data Analyst

  • Multimodal data processing and analysis on several projects, including healthy and clinical data. My role is processing and analysing structural, diffusion and functional MRI and phenotypic data, much of which has been published in high-impact clinical and neuroscience journals.
  • Developing and integrating data-solutions with pre-existing and in-house toolboxes for novel and robust data processing and analysis.
  • Developing and applying sophisticated statistical and modelling techniques including machine learning, statistical inference, and computational models of psychosis, Alzheimer’s dementia, multiple sclerosis, and healthy brain function.

College of Engineering, Science and Environment (CESE), University of Newcastle
Australia
1/10/2018 - 31/12/2019 Research Assistant

  • Employed under an AQIP grant in partnership with Mater Hospital and Queensland University of Technology. My role was using mathematical modelling in combination with high angular resolution diffusion imaging to determine structural networks in SEEG patients with refractory epilepsy.
  • Developed a paradigm in Python for neurofeedback for use in a pilot study looking at the phenomenon of non-responders to neurofeedback treatment, using healthy subjects.

Queensland Institute of Medical Research
Australia
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Publications

For publications that are currently unpublished or in-press, details are shown in italics.


Journal article (7 outputs)

Year Citation Altmetrics Link
2024 Alshehri A, Koussis N, Al-Iedani O, Khormi I, Lea R, Ramadan S, Lechner-Scott J, 'Improvement of the thalamocortical white matter network in people with stable treated relapsing-remitting multiple sclerosis over time.', NMR Biomed, e5119 (2024) [C1]
DOI 10.1002/nbm.5119
Co-authors Saadallah Ramadan, Oun Aliedani, Jeannette Lechnerscott
2024 Alshehri A, Koussis N, Al-Iedani O, Arm J, Khormi I, Lea S, et al., 'Diffusion tensor imaging changes of the cortico-thalamic-striatal tracts correlate with fatigue and disability in people with relapsing-remitting MS.', Eur J Radiol, 170 111207 (2024) [C1]
DOI 10.1016/j.ejrad.2023.111207
Citations Scopus - 1
Co-authors Jeannette Lechnerscott, Saadallah Ramadan, Oun Aliedani
2023 Borne L, Tian Y, Lupton MK, van der Meer JN, Jeganathan J, Paton B, et al., 'Functional re-organization of hippocampal-cortical gradients during naturalistic memory processes.', Neuroimage, 271 119996 (2023) [C1]
DOI 10.1016/j.neuroimage.2023.119996
Citations Scopus - 5Web of Science - 1
Co-authors Michael Breakspear, Bryan Paton
2023 Koussis NC, Burgher B, Jeganathan J, Scott JG, Cocchi L, Breakspear M, 'Cognitive Control System Gates Insula Processing of Affective Stimuli in Early Psychosis', Schizophrenia Bulletin, 49 987-996 (2023) [C1]

Background and Hypothesis: Impairments in the expression, experience, and recognition of emotion are common in early psychosis (EP). Computational accounts of psychosis suggest di... [more]

Background and Hypothesis: Impairments in the expression, experience, and recognition of emotion are common in early psychosis (EP). Computational accounts of psychosis suggest disrupted top-down modulation by the cognitive control system (CCS) on perceptual circuits underlies psychotic experiences, but their role in emotional deficits in EP is unknown. Study Design: The affective go/no-go task was used to probe inhibitory control during the presentation of calm or fearful faces in young persons with EP and matched controls. Computational modeling of functional magnetic resonance imaging (fMRI) data were performed using dynamic causal modeling (DCM). The influence of the CCS on perceptual and emotional systems was examined using parametric empirical bayes. Study Results: When inhibiting motor response to fearful faces, EP participants showed higher brain activity in the right posterior insula (PI). To explain this, we used DCM to model effective connectivity between the PI, regions from the CCS activated during inhibition (dorsolateral prefrontal cortex [DLPFC] and anterior insula [AI]), and a visual input region, the lateral occipital cortex (LOC). EP participants exerted a stronger top-down inhibition from the DLPFC to the LOC than controls. Within the EP cohort, increased top-down connectivity between the LOC and AI was associated with a higher burden of negative symptoms. Conclusions: Young persons with a recent onset of psychosis show a disturbance in the cognitive control of emotionally salient stimuli and the suppression of irrelevant distractors. These changes are associated with negative symptoms, suggesting new targets for the remediation of emotional deficits in young persons with EP.

DOI 10.1093/schbul/sbad010
Co-authors Michael Breakspear
2023 Alshehri A, Al-iedani O, Koussis N, Khormi I, Lea R, Lechner-Scott J, Ramadan S, 'Stability of longitudinal DTI metrics in MS with treatment of injectables, fingolimod and dimethyl fumarate', NEURORADIOLOGY JOURNAL, 36 388-396 (2023) [C1]
DOI 10.1177/19714009221140511
Citations Scopus - 3Web of Science - 3
Co-authors Oun Aliedani, Saadallah Ramadan, Jeannette Lechnerscott
2021 Burgher B, Whybird G, Koussis N, Scott JG, Cocchi L, Breakspear M, 'Sub-optimal modulation of gain by the cognitive control system in young adults with early psychosis', Translational Psychiatry, 11 (2021) [C1]

Executive dysfunctions in early psychosis (EP) are subtle but persistent, hindering recovery. We asked whether changes in the cognitive control system (CCS) disrupt the response t... [more]

Executive dysfunctions in early psychosis (EP) are subtle but persistent, hindering recovery. We asked whether changes in the cognitive control system (CCS) disrupt the response to increased cognitive load in persons with EP. In all, 30 EP and 30 control participants undertook multimodal MRI. Computational models of structural and effective connectivity amongst regions in the CCS were informed by cortical responses to the multi-source interference task, a paradigm that selectively introduces stimulus conflict. EP participants showed greater activation of CCS regions, including the superior parietal cortex, and were disproportionately slower at resolving stimulus conflict in the task. Computational models of the effective connectivity underlying this behavioral response suggest that the normative (control) group resolved stimulus conflict through an efficient and direct modulation of gain between the visual cortex and the anterior insula (AI). In contrast, the EP group utilized an indirect path, with parallel and multi-region hops to resolve stimulus conflict at the AI. Individual differences in task performance were dependent on initial linear gain modulations in the EP group versus a single nonlinear modulation in the control group. Effective connectivity in the EP group was associated with reduced structural integration amongst those connections critical for task execution. CCS engagement during stimulus conflict is hampered in EP owing to inefficient use of higher-order network interactions, with high tonic gain impeding task-relevant (phasic) signal amplification.

DOI 10.1038/s41398-021-01673-4
Citations Scopus - 5Web of Science - 2
Co-authors Michael Breakspear
2020 Sonkusare S, Nguyen VT, Moran R, van der Meer J, Ren Y, Koussis N, et al., 'Intracranial-EEG evidence for medial temporal pole driving amygdala activity induced by multi-modal emotional stimuli', Cortex, 130 32-48 (2020) [C1]

The temporal pole (TP) is an associative cortical region required for complex cognitive functions such as social and emotional cognition. However, mapping the TP with functional m... [more]

The temporal pole (TP) is an associative cortical region required for complex cognitive functions such as social and emotional cognition. However, mapping the TP with functional magnetic resonance imaging is technically challenging and thus understanding its interaction with other key emotional circuitry, such as the amygdala, remains elusive. We exploited the unique advantages of stereo-electroencephalography (sEEG) to assess the responses of the TP and the amygdala during the perception of emotionally salient stimuli of pictures, music and movies. These stimuli consistently elicited high gamma responses (70¿140 Hz) in both the TP and the amygdala, accompanied by functional connectivity in the low frequency range (2¿12 Hz). Computational analyses suggested that the TP drove this effect in the theta frequency range, modulated by the emotional valence of the stimuli. Notably, cross-frequency analysis indicated the phase of theta oscillations in the TP modulated the amplitude of high gamma activity in the amygdala. These results were reproducible across three types of sensory inputs including naturalistic stimuli. Our results suggest that multimodal emotional stimuli induce a hierarchical influence of the TP over the amygdala.

DOI 10.1016/j.cortex.2020.05.018
Citations Scopus - 9Web of Science - 3
Co-authors Michael Breakspear
Show 4 more journal articles

Conference (7 outputs)

Year Citation Altmetrics Link
2023 Burgher B, Koussis N, Whybird G, Scott J, Cocchi L, Breakspear M, 'Sub-optimal modulation of gain by the cognitive control system in young adults with early psychosis', JOURNAL OF COMPUTATIONAL NEUROSCIENCE (2023)
Co-authors Michael Breakspear
2023 Koussis N, Burgher B, Jeganathan J, Scott J, Cocchi L, Breakspear M, 'Cognitive control system gates insula subregion processing of affective stimuli in early psychosis', JOURNAL OF COMPUTATIONAL NEUROSCIENCE (2023)
Co-authors Michael Breakspear
2023 Al-iedani O, Alshehri A, Koussis N, Khormi I, Lea S, Lea R, et al., 'Diffusion metrics changes of the cortico-thalamic-striatal tracts correlate with fatigue and disability in people with MS', MULTIPLE SCLEROSIS JOURNAL, ITALY, Milan (2023)
Co-authors Jeannette Lechnerscott, Oun Aliedani, Saadallah Ramadan
2023 Alshehri A, Al-iedani O, Koussis N, Khormi I, Lea R, Ramadan S, Lechner-Scott J, 'Longitudinal diffusion metrics stability in Australian MS cohort treated with Injectables, Fingolimod and Dimethyl Fumarate:An analysis of treatment effects', MULTIPLE SCLEROSIS JOURNAL, ITALY, Milan (2023)
Co-authors Oun Aliedani, Saadallah Ramadan, Jeannette Lechnerscott
2022 Alshehri A, Al-Iedani O, Koussis N, Khormi I, Lea R, Lechner-Scott J, Ramadan S, 'Stability of longitudinal DTI metrics in MS with treatment of injectables, fingolimod and dimethyl fumarate', MULTIPLE SCLEROSIS JOURNAL, Amsterdam, NETHERLANDS (2022)
Co-authors Oun Aliedani, Jeannette Lechnerscott, Saadallah Ramadan
2022 Burgher B, Koussis N, Whybird G, Cocchi L, Scott JG, Breakspear M, 'THE RANZCP EARLY CAREER PSYCHIATRIST AWARD - SUB-OPTIMAL MODULATION OF GAIN BY THE COGNITIVE CONTROL SYSTEM IN YOUNG ADULTS WITH EARLY PSYCHOSIS', AUSTRALIAN AND NEW ZEALAND JOURNAL OF PSYCHIATRY (2022)
Co-authors Michael Breakspear
2022 Burgher B, Whybird G, Koussis N, Scott JG, Cocchi L, Breakspear M, 'SUBOPTIMAL MODULATION OF GAIN BY THE COGNITIVE CONTROL SYSTEM IN YOUNG ADULTS WITH EARLY PSYCHOSIS', AUSTRALIAN AND NEW ZEALAND JOURNAL OF PSYCHIATRY (2022)
Co-authors Michael Breakspear
Show 4 more conferences

Preprint (1 outputs)

Year Citation Altmetrics Link
2024 Koussis N, Pang J, Jeganathan J, Paton B, Fornito A, Robinson PA, et al., 'Generation of surrogate brain maps preserving spatial autocorrelation through random rotation of geometric eigenmodes (2024)
DOI 10.1101/2024.02.07.579070
Co-authors Michael Breakspear
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Grants and Funding

Summary

Number of grants 1
Total funding $2,500

Click on a grant title below to expand the full details for that specific grant.


20231 grants / $2,500

Brain Neuromodulation Research Program Seed Funding$2,500

Funding body: Brain Neuromodulation Research Program, HMRI

Funding body Brain Neuromodulation Research Program, HMRI
Project Team

Michael Breakspear

Scheme Seed Funding
Role Lead
Funding Start 2023
Funding Finish 2023
GNo
Type Of Funding Grant - Aust Non Government
Category 3AFG
UON N
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Research Supervision

Number of supervisions

Completed4
Current0

Highlighted Supervision

Commenced Level of Study Research Title Program Supervisor Type
2022 Honours White matter connectivity reductions in early psychosis
A 4th year medical student research project into white matter dysfunction in first-episode psychotic individuals, I facilitated the data preprocessing and analysis, as well as the guidance of hypotheses, literature review, and report writing.
Medical Science, College of Health, Medicine & Wellbeing - The University of Newcastle Co-Supervisor

Past Supervision

Year Level of Study Research Title Program Supervisor Type
2023 Honours White matter connectivity reductions in early psychosis Medical Science, College of Health, Medicine & Wellbeing - The University of Newcastle Co-Supervisor
2023 Honours White matter connectivity reductions in early psychosis Medical Science, College of Health, Medicine & Wellbeing - The University of Newcastle Co-Supervisor
2023 Honours White matter connectivity reductions in early psychosis Medical Science, College of Health, Medicine & Wellbeing - The University of Newcastle Co-Supervisor
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Mr Nikitas Koussis

Positions

Casual Data Analyst
School of Psychological Sciences
College of Engineering, Science and Environment

Research Assistant
Office PVC - Health, Medicine and Wellbeing
College of Health, Medicine and Wellbeing

Contact Details

Email nikitas.koussis@newcastle.edu.au
Link Twitter
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