Ms Inna Tishchenko

Ms Inna Tishchenko

Research Academic

School of Elect Engineering and Computer Science

Career Summary

Biography

Inna joined the University of Newcastle as research academic at the Priority Research Centre for Bioinformatics, Biomarker Discovery and Information-Based medicine (CIBM) in 2014, following her interests in data analysis and biomedical science.

Inna graduated with a Master of Science degree in Mechanical Engineering with a focus in Robotics, Systems and Control, from the Swiss Federal Institute of Technology Zurich (ETH Zurich), Switzerland, in 2012. In the years 2010 and 2011 she was employed by ETH Zurich as a teaching assistant in computational mathematics. Inna completed her master's thesis in collaboration with ABB Corporate Research Switzerland Ltd, during which she solved the optimisation problem of minimising fuel consumption of dual fuel turbocharged engines. Following the completion of her master's degree, she accomplished an internship with the Commonwealth Scientific and Industrial Research Organisation (CSIRO), where she worked on computer vision related problems.

At CIBM, Inna has been involved in data analysis for Breast Cancer and Alzheimer's Disease related data. She has been working on molecular subtyping and DNA copy number aberration problems within malignant breast tissue, specifically covering cancer tumours of basal-like, luminal and HER2-enriched types. Inna has also worked on the clustering problem of stratifying Alzheimer's Disease patients into distinct groups by their symptomatic characteristics. Her research brings together a number of disciplines and techniques, including clustering and classification problems, graph analysis, filtering techniques, survival analysis, statistical significance analysis and biomedical interpretation of the results.


Qualifications

  • Master of Science (Mechanical Engineering), Swiss Federal Institute of Technology - Zurich
  • Bachelor of Science (Mechanical Engineering), Swiss Federal Institute of Technology - Zurich

Keywords

  • Bioinformatics
  • Data Analysis
  • Machine Learning
  • Systems Analysis

Languages

  • German (Fluent)
  • Russian (Fluent)
  • French (Working)

Fields of Research

Code Description Percentage
010406 Stochastic Analysis and Modelling 30
170203 Knowledge Representation and Machine Learning 40
060102 Bioinformatics 30

Professional Experience

Academic appointment

Dates Title Organisation / Department
1/04/2014 -  Research Academic University of Newcastle
School of Elect Engineering and Computer Science
Australia
1/02/2010 - 1/06/2011 Tutor in Numerical Analysis and Mechanical Oscillations ETH Zurich (Swiss Federal Institute of Technology Zurich)
Department of Mechanical and Process Engineering
Switzerland

Professional appointment

Dates Title Organisation / Department
1/11/2012 - 31/08/2013 Research Internship in Computer Vision CSIRO (Commonwealth Scientific and Industrial Research Organisation)
ICT Centre
Australia
1/03/2012 - 1/09/2012 Master's Thesis in Optimisation Problems ABB Corporate Research Switzerland Ltd
Switzerland
1/09/2011 - 31/12/2011 Work Experience Internship in Control Systems ABB Switzerland Ltd
Turbocharging Systems
Switzerland
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Publications

For publications that are currently unpublished or in-press, details are shown in italics.


Journal article (4 outputs)

Year Citation Altmetrics Link
2016 Tishchenko I, Riveros C, Moscato P, 'Alzheimer¿s disease patient groups derived from a multivariate analysis of cognitive test outcomes in the Coalition Against Major Diseases dataset', Future Science OA, FSO140-FSO140 (2016)
DOI 10.4155/fsoa-2016-0041
2016 Tishchenko I, Milioli HH, Riveros C, Moscato P, 'Extensive Transcriptomic and Genomic Analysis Provides New Insights about Luminal Breast Cancers', PLOS ONE, 11 (2016)
DOI 10.1371/journal.pone.0158259
Co-authors Carlos Riveros
2016 Milioli HH, Vimieiro R, Tishchenko I, Riveros C, Berretta R, Moscato P, 'Iteratively refining breast cancer intrinsic subtypes in the METABRIC dataset.', BioData Min, 9 2 (2016) [C1]
DOI 10.1186/s13040-015-0078-9
Citations Scopus - 1Web of Science - 1
Co-authors Regina Berretta, Carlos Riveros, Pablo Moscato
2015 Milioli HH, Vimieiro R, Riveros C, Tishchenko I, Berretta R, Moscato P, 'The Discovery of Novel Biomarkers Improves Breast Cancer Intrinsic Subtype Prediction and Reconciles the Labels in the METABRIC Data Set.', PLoS One, 10 e0129711 (2015) [C1]
DOI 10.1371/journal.pone.0129711
Citations Scopus - 1Web of Science - 1
Co-authors Carlos Riveros, Regina Berretta, Pablo Moscato
Show 1 more journal article

Conference (6 outputs)

Year Citation Altmetrics Link
2015 Milioli H, Tishchenko I, Riveros C, Berretta R, Moscato P, 'BASAL-LIKE BREAST CANCER SUBGROUPS UNCOVERED BY GENOMIC AND TRANSCRIPTOMIC PROFILES AND OVERALL SURVIVAL OUTCOMES', ASIA-PACIFIC JOURNAL OF CLINICAL ONCOLOGY (2015) [E3]
Co-authors Regina Berretta, Pablo Moscato
2015 Tishchenko I, Milioli H, Riveros C, Moscato P, 'HOW INTRINSIC ARE LUMINAL BREAST CANCER SUBTYPES?', ASIA-PACIFIC JOURNAL OF CLINICAL ONCOLOGY (2015) [E3]
Co-authors Carlos Riveros, Pablo Moscato
2015 Tishchenko I, Riveros C, Moscato P, 'REVISION OF MOLECULAR BREAST CANCER SUBTYPES', ASIA-PACIFIC JOURNAL OF CLINICAL ONCOLOGY (2015) [E3]
Co-authors Pablo Moscato
2015 Milioli HH, Tishchenko I, Riveros C, Berretta R, Moscato P, 'Molecular classification of basal-like breast cancer subtypes based on predictive survival markers', ANNALS OF ONCOLOGY (2015) [E3]
DOI 10.1093/annonc/mdv117.11
Co-authors Carlos Riveros, Pablo Moscato, Regina Berretta
2015 Milioli HH, Tishchenko I, Riveros C, Sakoff J, Berretta R, Moscato P, 'Consensus on breast cancer cell lines classification for an effective and efficient clinical decision-making', ANNALS OF ONCOLOGY (2015) [E3]
DOI 10.1093/annonc/mdv121.8
Co-authors Jennette Sakoff, Pablo Moscato, Carlos Riveros, Regina Berretta
2015 Milioli HH, Vimieiro R, Tishchenko I, Riveros C, Berretta R, Moscato P, 'Refining the breast cancer molecular subtypes in the METABRIC data set' (2015) [O1]
Co-authors Regina Berretta, Pablo Moscato
Show 3 more conferences
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Ms Inna Tishchenko

Position

Research Academic
School of Elect Engineering and Computer Science
Faculty of Engineering and Built Environment

Contact Details

Email inna.tishchenko@newcastle.edu.au
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